nmatzke / BEASTmasteR
R code for writing Beast2 XML (especially morphology/tip-dating)
☆11Updated 6 months ago
Alternatives and similar repositories for BEASTmasteR:
Users that are interested in BEASTmasteR are comparing it to the libraries listed below
- R Interfaces to Phylogenetic Software☆11Updated 8 months ago
- R package to run BEAST2☆11Updated last week
- A program for multimodel inference on speciation and trait evolution☆33Updated 7 years ago
- Phylogenetic ANalyses of DiversificAtion☆24Updated last week
- This repo contains tutorials and data for the workshop on phylogenetic methods being delivered at the 2019 Evolution conference in Provid…☆13Updated 5 years ago
- Bayesian species delimitation integrating genes and traits☆12Updated 3 years ago
- Scalable relaxed clock phylogenetic dating☆24Updated 9 months ago
- Machuruku☆30Updated last week
- babette is an R package to work with BEAST2☆44Updated 6 months ago
- Python version of PHLAWD☆21Updated 2 months ago
- Phylogenetic penalized likelihood☆47Updated 5 months ago
- Metabarcoding analyses pipeline - metaBarcoding and Environmental DNA Analysis Tool☆18Updated 5 years ago
- An R-wrapper for lsd2☆9Updated last year
- Exploring the Phylogenetic Signal in Continuous Traits☆16Updated last year
- Species occurrence dot maps in R☆20Updated 2 years ago
- A textbook for phylogenetic comparative methods.☆42Updated 5 years ago
- An automated pipeline for retrieving orthologous DNA sequences from GenBank in R☆23Updated 5 months ago
- R package to generate the same BEAST2 XML parameter files as generated by BEAUti 2☆13Updated this week
- Codes for calculating delta, a phylogenetic analog of the Shannon entropy for measuring the degree of phylogenetic signal between a categ…☆25Updated 3 years ago
- ☆19Updated 7 months ago
- Modification of BayesAss 3.0.4 to allow handling of large SNP datasets☆15Updated 2 years ago
- Spatial Phylogenetic Reconstruction of Evolutionary Dynamics 3☆13Updated last year
- method for modeling continuous and discrete population genetic structure☆35Updated last year
- initial commit☆26Updated 2 years ago
- Fits a generalized form of the covarion model that allows different transition rate classes on different portions of a phylogeny by treat…☆11Updated this week
- ☆17Updated 7 months ago
- An R Package to build and simulate coalescent models☆19Updated 9 months ago
- Simplified Tracer in R and Extras☆9Updated last month
- BioGeography with Bayesian (and likelihood) Evolutionary Analysis with R Scripts☆61Updated 3 months ago
- A suite of methods and models for studying evolutionary radiations☆22Updated last year