thashim / population-diffusionsLinks
Code and paper repository for the ICML paper "Learning population level diffusions with generative recurrent networks"
☆11Updated 9 years ago
Alternatives and similar repositories for population-diffusions
Users that are interested in population-diffusions are comparing it to the libraries listed below
Sorting:
- ☆30Updated 4 years ago
- ☆10Updated 2 years ago
- ☆63Updated 2 years ago
- Attraction-Repulsion Spectrum in Neighbor Embeddings☆31Updated 3 years ago
- A simulator for single-cell expression data guided by gene regulatory networks☆72Updated last year
- ☆56Updated 6 months ago
- ☆34Updated 2 months ago
- Dynamic inference from single-cell snapshots by optimal transport☆19Updated last year
- This Python package will allow you to replicate the experiments from our research on applying Optimal Transport as a similarity metric in…☆42Updated 2 years ago
- TrajectoryNet: A Dynamic Optimal Transport Network for Modeling Cellular Dynamics☆131Updated last year
- Simulating single-cell data using gene regulatory networks 📠☆79Updated last year
- Conditional out-of-distribution prediction☆61Updated last year
- ☆28Updated 3 years ago
- Gromov-Wasserstein based optimal transport for aligning single-cell multi-omics data☆77Updated last year
- Latent spaces for single cells☆21Updated 2 years ago
- Python code for genetic marker selection using linear programming☆42Updated last year
- Git Repo for simulating Boolean Models☆36Updated 2 months ago
- Learning disentangled representations of single-cell data for high-quality generation☆16Updated last year
- Gaussian process regression package for counts data with negative binomial and zero-inflated negative binomial likelihoods☆23Updated 10 months ago
- Code repository for the paper "Towards a Comprehensive Evaluation of Dimension Reduction Methods for Data Visualization"☆14Updated last year
- Deep Generative Modeling of RNA Velocity☆35Updated 2 months ago
- An unsupervised scRNA-seq analysis workflow with graph attention networks☆25Updated 2 years ago
- A Library for Denoising Single-Cell Data with Random Matrix Theory☆37Updated 2 years ago
- A generative topic model that facilitates integrative analysis of large-scale single-cell RNA sequencing data.☆53Updated 3 years ago
- Code for Nature Scientific Reports 2020 paper: "Unsupervised generative and graph neural methods for modelling cell differentiation" by I…☆18Updated 5 years ago
- Deep Large-Scale Inference UsingKnockoffs☆11Updated 4 years ago
- Learning Single-Cell Perturbation Responses using Neural Optimal Transport☆153Updated last year
- CellBox: Interpretable Machine Learning for Perturbation Biology☆56Updated 2 years ago
- Simple scVI implementation☆12Updated 3 weeks ago
- Reproducing the experiments of the paper "Deep generative modeling for single-cell transcriptomics"☆56Updated 7 years ago