DRUG (Digital RNA with pertUrbation of Genes)-seq data analysis pipeline
☆35Mar 19, 2025Updated last year
Alternatives and similar repositories for DRUG-seq
Users that are interested in DRUG-seq are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆18Oct 31, 2025Updated 7 months ago
- JS API Client for DatafyCMS☆10Apr 27, 2021Updated 5 years ago
- Library of Integrated Cellular Signatures L1000☆31Apr 21, 2022Updated 4 years ago
- PKSmart: Predicting PK properties using Chemical Structures☆21Sep 26, 2025Updated 8 months ago
- Automated ingestion and conversion of various single-cell data formats, within and across species☆15Jan 26, 2026Updated 4 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Tutorials on using latest dynamo package☆27Dec 21, 2025Updated 5 months ago
- ☆12May 6, 2022Updated 4 years ago
- SIGnature is a Python package that empowers researchers to rapidly query gene sets across diverse single-cell RNA sequencing (scRNA-seq) …☆33May 27, 2026Updated 2 weeks ago
- PISCES is a pipeline for rapid transcript quantitation, genetic fingerprinting, and quality control assessment of RNAseq libraries using …☆30Mar 20, 2026Updated 2 months ago
- ☆17Dec 18, 2024Updated last year
- R package for computing Association Plots☆17Nov 4, 2024Updated last year
- A pipeline for Smooth-seq data analysis.☆10Sep 23, 2021Updated 4 years ago
- Pipeline for RNA and DNA integrated analysis for somatic mutation detection☆13May 20, 2026Updated 3 weeks ago
- MorphoDiff is a diffusion based generative pipeline to predict high-resolution cell morphological responses under different conditions ba…☆33Mar 20, 2026Updated 2 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- A method for calculating single cell entropy and reconstructing cell differentiation lineage using single-cell RNA-seq data☆10May 26, 2023Updated 3 years ago
- Analysis pipeline for RNA structural probing mutational profiling data sequenced on Nanopore devices☆11Feb 10, 2024Updated 2 years ago
- Analyze CRISPR and shRNA functional genetic screening data☆13Jun 3, 2026Updated last week
- Python code for cross-condition label refinement in single-cell data with HiDDEN☆14Sep 21, 2024Updated last year
- Granular Functional Filtering (Gruffi) to isolate stressed cells☆14Nov 7, 2024Updated last year
- Detecting cancer subtypes with machine learning.☆10Feb 5, 2020Updated 6 years ago
- Make machine learning simpler with Galaxy☆12Jul 16, 2024Updated last year
- Import and run CWL workflows on DNAnexus (alpha)☆13Sep 12, 2018Updated 7 years ago
- time course regulatory analysis from paired gene expression and chromatin accessibility time course data☆11Nov 10, 2023Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆10Jul 9, 2024Updated last year
- Test genes for Spatial Variation☆15Dec 20, 2024Updated last year
- scRNA seq analysis using Seurat V3☆13Jun 23, 2021Updated 4 years ago
- Genotype-Neighborhood Associations: A tool for identifying genetic variant associations to the abundance of cell states in single-cell d…☆17Oct 5, 2024Updated last year
- Bencharking pipeline for evaluating Transcriptomic representations for perturbation tasks☆13Nov 5, 2024Updated last year
- Cell type pipes for R☆53Jan 27, 2024Updated 2 years ago
- ☆15Jul 7, 2023Updated 2 years ago
- Generate masks for scRNA-seq clusters on t-SNE or UMAP plots☆45Apr 23, 2026Updated last month
- Lightning fast Search Bar component for React using Trie! Get filtered results and suggested searches on the go!☆11Dec 3, 2022Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Examples for gget (https://github.com/pachterlab/gget).☆39Feb 20, 2026Updated 3 months ago
- R package of utilities for handling paths, files and directories☆19Jan 14, 2019Updated 7 years ago
- Companion to "A genome-wide almanac of co-essential modules assigns function to uncharacterized genes" (https://doi.org/10.1101/827071)☆27Jul 19, 2022Updated 3 years ago
- LORIS: A LOgistic Regression-based Immunotherapy-response Score☆16Nov 18, 2024Updated last year
- Code and analysis pipeline for NASC-seq.☆11Jun 14, 2022Updated 3 years ago
- Miscellaneous helper tools for epidemiologists☆10Nov 9, 2025Updated 7 months ago
- A Bio2BEL package for DrugBank (https://www.drugbank.ca)☆10Dec 14, 2020Updated 5 years ago