xuefliang / RInMedicine
☆11Updated 8 years ago
Related projects ⓘ
Alternatives and complementary repositories for RInMedicine
- Integrating LASSO and bootstrapping algorithm to find best prognostic or predictive biomarkers☆20Updated 2 years ago
- Validating glioblastoma immune cell immunohistochemsitry using computational deconvolution of TCGA tumors☆14Updated 5 years ago
- Prostate Cancer Alteration Signature Analysis https://xsliulab.github.io/PC_CNA_signature/☆12Updated 3 years ago
- TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020☆30Updated 3 years ago
- bioinformatics R test code☆13Updated 2 years ago
- Molecular Signatures Database (MSigDB) in a data frame☆17Updated 5 years ago
- Useful Utilities for Statistics and Visualization.☆19Updated last month
- Scripts for plotting figures and running analysis throughout the manuscript☆11Updated 3 years ago
- R code for Combining gene mutation with gene expression data improves outcome prediction in myelodysplastic syndromes☆12Updated 8 years ago
- ☆16Updated 4 years ago
- Code for the paper on the ICR immune signatures and prognostic significance pan-cancer (TCGA)☆10Updated 4 years ago
- Pretty, simple, optionally interactive plots for bioinformatics analysis pipelines☆14Updated last year
- R package☆21Updated 11 months ago
- LncmiRSRN: Identifying lncRNA related miRNA sponge regulatory network☆13Updated 2 years ago
- Tumour Heterogeneity and Intercellular Networks of Nasopharyngeal Carcinoma at Single Cell Resolution☆10Updated last year
- Analysis pipelines for QTL discovery and GWAS signals interpretation☆9Updated 2 months ago
- HTCA Analysis Tools☆4Updated 2 years ago
- This repo contains the code necessary to reproduce the clusters found in "The Immune Landscape of Cancer".☆19Updated 5 years ago
- Calculating Tumor microenvironment score☆27Updated last year
- ☆23Updated last year
- Data visualization with R☆11Updated 3 years ago
- ☆14Updated last year
- Bioinformatics Pipeline☆12Updated 2 years ago
- eVITTA: an easy Visualization and Inference Toolbox for Transcriptome Analysis☆12Updated 7 months ago
- Kidney Epigenome and Transcriptome-based multi-stage Prioritization☆16Updated 2 years ago
- Immune Cell Gene Signatures for Profiling the Microenvironment of Solid Tumours☆26Updated 3 years ago
- Package for calculation of Homologous Recombination Deficiency☆13Updated 4 years ago
- 🐯 tigeR: Tumor Immunotherapy Gene Expression Data Analysis R package☆28Updated 5 months ago
- R/Package Version Check☆23Updated 3 years ago
- single cell and bulk RNASeq analysis scripts☆12Updated 2 years ago