antonkulaga / cromwell-clientLinks
Client for the Cromwell workflow engine
☆17Updated last year
Alternatives and similar repositories for cromwell-client
Users that are interested in cromwell-client are comparing it to the libraries listed below
Sorting:
- Convert CWL to WDL☆17Updated 8 years ago
- [Experimental] Workflow Definition Language (WDL) to CWL☆28Updated 3 years ago
- ☆15Updated 2 months ago
- A library for manipulating bioinformatics sequencing formats in Apache Spark☆32Updated 3 months ago
- Prepare Sailfish and Salmon output for downstream analysis☆43Updated 6 years ago
- Manuscript describing ChronQC is now available online in Bioinformatics☆18Updated 5 years ago
- Workflow Description Language compiler for the DNAnexus platform☆40Updated last year
- Easily run WDL workflows on GCP☆13Updated 3 years ago
- Python client for GA4GH htsget protocol☆15Updated 2 years ago
- WDL tools for parsing, type-checking, and more☆25Updated last month
- Benchmarking toolkit for variant calling☆47Updated 4 years ago
- Basic, no assumptions, multi-pileup☆24Updated 11 years ago
- Toil workflows for common genomic pipelines☆33Updated 5 years ago
- ☆13Updated 7 years ago
- Import a CWL workflow specification to Nextflow script (experimental)☆27Updated 6 years ago
- NExt generation Analysis Toolbox☆14Updated 9 years ago
- Test data for MultiQC.☆22Updated last week
- Analysis Framework for Biological Data from High Throughput Experiments☆34Updated 8 years ago
- A novel pipeline framework to accelerate bioinformatics analysis☆29Updated 2 years ago
- A genomics pipeline build on top of the GATK Queue framework. Main repository: https://github.com/NationalGenomicsInfrastructure/piper (m…☆21Updated 8 years ago
- Load genomic BAM files using Apache Spark☆21Updated 6 years ago
- WDL plugin for pytest☆48Updated last year
- Tools for handling HiC and 5C data☆24Updated last year
- A pipeline to rapidly detect exogenous DNA integration sites using DNA or RNA paired-end sequencing data☆12Updated 2 years ago
- Workflow Description Language - Specification and Implementations☆26Updated 6 years ago
- Predict the functional consequences of both coding and non-coding single nucleotide variants (SNVs)☆20Updated 4 years ago
- Chart to aid in understanding mutations and their location on a gene.☆22Updated 2 years ago
- ☆18Updated 7 years ago
- Docker images of bioinformatics software☆21Updated 7 years ago
- Distributed execution of bioinformatics tools on Apache Spark. Apache 2 licensed.☆41Updated 3 months ago