A crate for working with the Task Execution Service (TES) specification.
☆13Jan 8, 2026Updated last month
Alternatives and similar repositories for tes
Users that are interested in tes are comparing it to the libraries listed below
Sorting:
- A Rust-based, headless workflow execution framework supporting local, cloud, and HPC.☆50Feb 11, 2026Updated 3 weeks ago
- Foundations for the Rust omics ecosystem.☆13Oct 20, 2025Updated 4 months ago
- Rust crates for working with Workflow Description Language (WDL) documents.☆62Sep 23, 2025Updated 5 months ago
- Web Framework accelerates the development process with its flexibility & speed of use. Written as a library in C language. You can custom…☆15Dec 30, 2025Updated 2 months ago
- Generic SDK and CLI for GA4GH API services☆14Feb 2, 2026Updated last month
- STRspy: a novel alignment and quantification-based state-of-the-art method, short tandem repeat (STR) detection calling tool designed spe…☆18Feb 21, 2026Updated last week
- A bioinformatics workflow engine built on top of the Workflow Description Language (WDL).☆131Updated this week
- VHDL to Redstone Circuit Compiler☆25Dec 31, 2025Updated 2 months ago
- Client for the Cromwell workflow engine☆17Mar 7, 2024Updated last year
- cwl-tes submits your tasks to a TES server. Task submission is parallelized when possible.☆19Mar 2, 2023Updated 3 years ago
- Extends miniwdl to run workflows on AWS Batch & EFS☆22Feb 5, 2024Updated 2 years ago
- VEP-like tool for sequence ontology and HGVS annotation of VCF files☆25Updated this week
- 🧬 High-performance VCF file parser and reformatter with VEP annotation support. Converts complex VCF files to analyzable TSV format …☆45Aug 15, 2025Updated 6 months ago
- Fast FASTQ sample demultiplexing in Rust.☆67Updated this week
- BlipMQ simplifies real-time communication between microservices and distributed systems with a lightweight, blazing-fast broker that just…☆21Feb 3, 2026Updated last month
- ☆34Feb 27, 2024Updated 2 years ago
- Python library & CLI to create, view and edit PFB files☆12Feb 19, 2026Updated 2 weeks ago
- Sift client libraries and protocol buffers☆17Feb 26, 2026Updated last week
- Genome-wide TR catalog and variation clusters described in [Weisburd, Dolzhenko, et al. 2024]☆17Feb 19, 2026Updated 2 weeks ago
- ☆33Aug 2, 2022Updated 3 years ago
- Command line utility for working with next-generation sequencing files.☆38Jun 24, 2025Updated 8 months ago
- PAKCS: The Portland Aachen Kiel Curry system☆14Feb 22, 2026Updated last week
- Ruby Client for Comprehensive Knowledge Archive Network☆21May 16, 2016Updated 9 years ago
- ☆11Oct 11, 2024Updated last year
- A CNN model to identify MEIs in WGS☆12Mar 4, 2025Updated last year
- Powerful, developer-experience centric, blazingly fast and extensible job scheduler and workflow orchestration platform☆26Updated this week
- LAAVA: Long-read AAV Analysis☆13Dec 9, 2025Updated 2 months ago
- Python scripts that provide an interface to work with classical propositional and first-order logic, based on my solutions to the textboo…☆15Oct 2, 2025Updated 5 months ago
- A phase-aware pharmacogenomic diplotyper for PacBio datasets☆20Dec 9, 2025Updated 2 months ago
- Pipeline for Recombinant Yeast genoMEs That Identifies Markers of Engineering☆12May 13, 2024Updated last year
- Detect key Units in mosaic Tandem Repeats from representative reads from the same locus☆10Aug 2, 2023Updated 2 years ago
- Python script for calling SNPs, MNPs, and indels in mitochondrial DNA.☆10Apr 19, 2016Updated 9 years ago
- Papers We Portland☆13Aug 4, 2024Updated last year
- ☆17Jan 3, 2025Updated last year
- An actor implementation in Rust☆10Oct 12, 2025Updated 4 months ago
- Citation Style Language (CSL) API for Ruby☆16Oct 16, 2025Updated 4 months ago
- Wrapper over rust-htslib for building collections of BAM records for testing.☆10Dec 1, 2025Updated 3 months ago
- Mac App to Access App Menu at your Cursortips☆20Feb 13, 2026Updated 3 weeks ago
- A pipeline creation tool using Snakemake☆12Feb 20, 2026Updated 2 weeks ago