y9c / cfutilsLinks
đ§Ź Chromatogram File Utils, a package that integrates trace visualization, mutation calling and quality control for Sanger sequencing data.
â23Updated last month
Alternatives and similar repositories for cfutils
Users that are interested in cfutils are comparing it to the libraries listed below
Sorting:
- Multi-platform genome assembly pipeline for Illumina, Nanopore and PacBio readsâ60Updated 9 months ago
- A collection of scripts to assist in the retrieval of data from the ENA Browserâ86Updated last year
- A package to annotate protein sequencesâ58Updated 4 months ago
- Simple bacterial assembly and annotation pipelineâ75Updated 3 weeks ago
- Python bindings for the TaxonKit libraryâ41Updated last month
- â35Updated 2 years ago
- A Python module to analyze Sanger sequencing results.â24Updated last year
- transXpress: a Snakemake pipeline for streamlined de novo transcriptome assembly and annotationâ27Updated last year
- Flexible circular visualization of genome-associated data with BioPerl and SVG.â47Updated 6 years ago
- Detection of incorrectly labeled sequences across kingdomsâ86Updated 2 years ago
- PhyloCSF++ computes PhyloCSF tracks for whole-genome multiple sequence alignments, scores single MSA, annotates CDS features in GFF/GTF fâŚâ31Updated 3 years ago
- showTree can visualize the phylogeny, protein sequences and protein domains of a gene family in one figure.â30Updated 6 years ago
- Protein Alignment and Detection Interfaceâ61Updated last year
- CLI tool to annotate genes with KOfamâ80Updated 2 years ago
- Official repo for the standalone package of Coding Potential Calculator (CPC) 2.â24Updated 3 years ago
- Maximum likelihood demultiplexingâ47Updated 4 months ago
- Computational workflows for metagenomics tasks, by the Bhatt labâ47Updated 2 years ago
- Reference-guided multiple sequence alignment of viral genomesâ68Updated 2 weeks ago
- Ultra-efficient taxonomic mapping of NGS dataâ52Updated 4 years ago
- seqfu - Sequece Fastx Utilitiesâ116Updated 5 months ago
- â26Updated 4 years ago
- Pauvre: QC and genome browser plotting Oxford Nanopore and PacBio long reads.â54Updated 7 months ago
- â30Updated 6 months ago
- Miscellaneous Bioinformatics scripts etc mostly in Pythonâ45Updated 3 weeks ago
- Design degenerated primers on highly variable alignments for full genome sequencing or qPCR. Specifically developed for viruses.â38Updated 3 weeks ago
- Automated Sanger Analysis Pipeline (ASAP): a tool for rapidly analyzing Sanger sequencing data with minimum user interference.â25Updated 4 months ago
- Fully automated generation of UCSC assembly hubsâ34Updated 8 months ago
- â35Updated last year
- Error correction for Illumina RNA-seq readsâ67Updated last year
- This repository hosts a large collection of Nextflow snippetsâ57Updated 5 months ago