magnusdv / quickpedLinks
An online pedigree tool for research applications. Build pedigrees interactively and store as images or text files in ped format. QuickPed also computes a variety of relatedness coefficients and offers verbal descriptions of pairwise relationships.
☆30Updated last week
Alternatives and similar repositories for quickped
Users that are interested in quickped are comparing it to the libraries listed below
Sorting:
- A set of tools to annotate VCF files with expression and readcount data☆30Updated last week
- A bioinformatics best-practice analysis pipeline for the analysis of shallow whole genome sequencing (sWGS) data for the identification o…☆14Updated this week
- ☆15Updated last year
- CADD-SV – a framework to score the effect of structural variants☆18Updated last week
- This repository contains information about ongoing analysis performed by GIAB☆14Updated 6 years ago
- ☆29Updated 6 years ago
- Mapped QC analysis program☆43Updated 7 years ago
- Genomic VCF to tab-separated values☆48Updated 2 years ago
- Splice junction analysis and filtering from BAM files☆42Updated 3 years ago
- A webtool for the clinical interpretation of CNVs in rare disease patients☆13Updated 3 years ago
- BigWig manpulation tools using libBigWig and htslib☆30Updated last year
- Bamgineer: Introduction of simulated allele-specific copy number variants into exome and targeted sequence data sets☆38Updated 5 years ago
- Flexible Bayesian inference of mutational signatures☆41Updated 3 years ago
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆42Updated 3 years ago
- Phylogeny-based Contamination Detection in Mitochondrial and Whole-Genome Sequencing Studies☆18Updated 2 years ago
- (WIP) best-practices workflow for rare disease☆62Updated last year
- Samwell: a python package for using genomic files... well☆20Updated 3 years ago
- deepStats: a stastitical toolbox for deeptools and genomic signals☆35Updated 4 years ago
- Immuological gene typing and annotation for genome assembly☆38Updated 10 months ago
- Reducing reference bias using multiple population reference genomes☆34Updated last year
- Intersect multiple VCF files with haplotype awareness☆26Updated 4 years ago
- GARFIELD-NGS: Genomic vARiants FIltering by dEep Learning moDels in NGS☆17Updated 6 years ago
- highly-efficient & lightweight mutation signature matrix aggregation☆19Updated 4 years ago
- ☆23Updated 3 months ago
- A small R package to make sequencing read coverage plots in R.☆40Updated last month
- a set of NGS pipelines☆24Updated this week
- Validation runs using bcbio: germline, somatic, structural variant calling and RNA-seq analyses☆31Updated 3 years ago
- ☆24Updated 8 months ago
- Population-based detection of structural variation from High-Throughput Sequencing.☆33Updated 3 years ago
- Tool for parsing outputs from fusion detection tools. Part of a nf-core/rnafusion pipeline. Checkout a live demo at https://matq007.githu…☆28Updated 7 months ago