JhuangLab / iseqLinks
An integrated analysis toolkit and pipeline for Next-Generation Sequencing (NGS) panel sequencing data
☆14Updated 7 years ago
Alternatives and similar repositories for iseq
Users that are interested in iseq are comparing it to the libraries listed below
Sorting:
- Openbiox 翻译小组发起并维护的优秀 Workflow 翻译项目☆27Updated 5 years ago
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated this week
- NASQAR: A web-based platform for High-throughput sequencing data analysis and visualization☆32Updated 5 years ago
- ☆31Updated last year
- Pipeline to filter whole exome vcf files and generate a report document for clinical diagnostics.☆14Updated 5 years ago
- 📊 An R package of RNA-seq workflow☆15Updated 3 years ago
- Genomic data interpretation and visualization Workshop☆21Updated 3 weeks ago
- pathway based data integration and visualization☆41Updated 6 months ago
- An R Package based on JavaScript libraries for Visualization of Interactive Circos Plot☆28Updated 3 years ago
- Python function for TMB snake plots☆16Updated 5 years ago
- A standalone interactive application for detecting biological significance on a set of genes☆40Updated 4 years ago
- A command line tool to compute mapping statistics from a BAM file☆24Updated 3 years ago
- Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.☆35Updated 2 years ago
- The official repository for the deepSNV bioconductor packages. Branch master tracks the official Bioconductor development branch.☆17Updated 3 years ago
- interactive plots for differential expression analysis☆34Updated 3 months ago
- ☆17Updated last year
- ☆28Updated 2 years ago
- R package wrapping bedtools☆44Updated 6 months ago
- novoBreak: local assembly for breakpoint detection in cancer genomes☆25Updated 7 years ago
- ☆18Updated 4 years ago
- methylR: a single shiny solution from sequencer data to pathway analysis☆12Updated 11 months ago
- Microbe-Metabolite INteractions-based metabolic profiles Predictor☆15Updated 2 years ago
- An R for fast and flexible DNA methylation analysis☆34Updated last week
- ☆29Updated 11 months ago
- documentation for trackViewer☆29Updated 6 years ago
- Method for Identifying Novel Transcripts and Isoforms using Equivalence classes, in cancer and rare disease.☆36Updated last year
- ORF Quantification pipeline for Alternative Splicing☆16Updated 4 years ago
- Combined mutation recurrence and functional impact to identify coding and non-coding cancer drivers☆15Updated 6 years ago
- R interface to the JBrowse 2 Linear Genome View.☆38Updated last year
- DriverPower☆26Updated 8 months ago