millett / pathology_learningLinks
Using traditional machine learning and deep learning methods to predict stuff from TCGA pathology slides.
☆18Updated 7 years ago
Alternatives and similar repositories for pathology_learning
Users that are interested in pathology_learning are comparing it to the libraries listed below
Sorting:
- DCAP:Integrating multi-omics data with deep learning for predicting cancer prognosis☆21Updated 4 years ago
- SEQUOIA: Digital profiling of cancer transcriptomes with grouped vision attention☆46Updated 7 months ago
- Multimodality Fusion Subtyping (Nature Communications)☆30Updated 8 months ago
- deep learning pipeline repository for the paper "Geospatial immune variability illuminates differential evolution of lung adenocarcinoma…☆52Updated 5 years ago
- The Single-Cell Pathology Landscape of Breast Cancer☆27Updated 5 years ago
- Convolutional neural networks for extracting a "deep stroma score" from histological images of human cancer☆17Updated 5 years ago
- Pan-cancer quantitative histopathology analysis using deep learning☆12Updated 3 years ago
- ☆56Updated 3 years ago
- SALMON: Survival Analysis Learning with Multi-Omics Neural Networks☆67Updated last year
- ☆32Updated 4 years ago
- Classifying tumor types based on Whole Genome Sequencing (WGS) data☆49Updated 2 years ago
- Spatial cellular architecture predicts prognosis in glioblastoma - Nature Communications☆25Updated 2 years ago
- Containerized cancer subtype prediction tools for gene expression, miRNA, DNA methylation, somatic mutations and copy number variation.☆29Updated 9 months ago
- IHC-image analysis workflow☆23Updated 7 years ago
- Self-supervised representation learning combining GTEx histology, RNA-seq and WGS☆33Updated 9 months ago
- Deep-Learning framework for multi-omic and survival data integration☆85Updated 2 years ago
- ☆35Updated this week
- A pan-cancer platform for mutation prediction from routine histology☆69Updated 4 years ago
- ☆35Updated 4 years ago
- Pan-cancer computational histopathology reveals mutations, tumor composition and prognosis☆77Updated 5 years ago
- ☆22Updated 3 years ago
- ☆17Updated 6 years ago
- ☆34Updated 3 years ago
- MEXPRESS is a data visualization tool designed for the visualization of TCGA expression, DNA methylation and clinical data.☆14Updated 5 years ago
- Histology Topography Cytometry Analysis Toolbox☆69Updated 2 months ago
- ☆47Updated 8 years ago
- ☆11Updated 5 years ago
- This project consists of three parts: Random forest model for GC diagnosis and Predict the survival outcomes of GC patient using RSF meth…☆31Updated last year
- Morphology-Enhanced Spatial Transcriptome Analysis Integrator☆27Updated 9 months ago
- A web tool to do automatic spots detections and positional adjustments for Spatial Transcriptomics Datasets.☆25Updated 3 years ago