FUSE filesystem for the DNAnexus storage system
☆13Apr 24, 2026Updated 4 months ago
Alternatives and similar repositories for dxfuse
Users that are interested in dxfuse are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Create WDL documentation using Markdown.☆29Nov 25, 2025Updated 9 months ago
- WDL and CWL compiler for the DNAnexus platform☆37Aug 5, 2026Updated 3 weeks ago
- A crate for working with genomics chain files.☆15Jul 20, 2026Updated last month
- A performant Kubernetes-based task executor for the Task Execution Service (TES) 1.1 specification.☆18Jul 23, 2026Updated last month
- Forensic analysis tool useful in backwards computing information from next-generation sequencing data.☆11Jul 27, 2026Updated last month
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- WDL tools for parsing, type-checking, and more☆28May 2, 2026Updated 4 months ago
- Command line utility for working with next-generation sequencing files.☆39Jun 24, 2025Updated last year
- CLI tool to manage the download of large quantities of files from DNAnexus☆19Aug 4, 2026Updated 3 weeks ago
- Foundations for the Rust omics ecosystem.☆31Jul 23, 2026Updated last month
- Bioinformatics workflows developed for and used on the St. Jude Cloud project.☆44Aug 25, 2026Updated last week
- DNAnexus platform client libraries☆111Updated this week
- Rust crates for working with Workflow Description Language (WDL) documents.☆62Sep 23, 2025Updated 11 months ago
- Interactive table from gemini output☆10Mar 5, 2019Updated 7 years ago
- edit distance sequence tags and helpers☆12Feb 4, 2021Updated 5 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ClaMSA (Classify Multiple Sequence Alignments).☆13Nov 21, 2024Updated last year
- The DNAnexus incremental upload script packaged as an Ansible Role☆13Apr 7, 2025Updated last year
- A Rust-based, headless workflow execution framework supporting local, cloud, and HPC.☆56Aug 26, 2026Updated last week
- Workflow Description Language compiler for the DNAnexus platform☆43Jun 29, 2023Updated 3 years ago
- Library for visualising genomic features in Python.☆16May 12, 2017Updated 9 years ago
- Variant Annotation, Segregation and Exclusion for family or cohort based rare-disease sequencing studies.☆12Jun 2, 2022Updated 4 years ago
- 🧬 Viral genome reference alignment☆12Jan 26, 2021Updated 5 years ago
- GA4GH Quality Control of Whole Genome Sequencing's metrics definition, benchmark resources and reference implementations☆26Jul 28, 2026Updated last month
- localised duplicate detection on patterned flow cells☆10Feb 27, 2019Updated 7 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Single-Cell Sequencing Quality Control and Processing Software☆30Sep 16, 2019Updated 6 years ago
- Percentile-normalization method for correcting batch effects in case-control studies☆12Oct 26, 2019Updated 6 years ago
- Lossless VCF compression☆22Mar 4, 2022Updated 4 years ago
- A fast and flexible program to annotate/interpret genetic variants in VCF/BCF file☆21Oct 26, 2020Updated 5 years ago
- Create "haplotype maps" of variants in order to use with Picardtools Crosscheck_Files utility, which allows for robust genotyping of func…☆29Jun 12, 2026Updated 2 months ago
- Scripts for creating a Kraken database from the Comprehensive Antibiotic Resistance Database☆10Dec 16, 2016Updated 9 years ago
- Collection of bioinformatics-related WDL modules and pipelines☆26Updated this week
- LAAVA: Long-read AAV Analysis☆13Dec 9, 2025Updated 8 months ago
- Lab notebook for people who like the command line.☆11Mar 6, 2026Updated 5 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- We present a customizable computational tool, PathSeq2.0, to enable the discovery and identification of microbial sequences in metagenomi…☆12Jan 20, 2018Updated 8 years ago
- Coronavirus (SARS-Cov-2) sequencing analysis☆10Oct 5, 2021Updated 4 years ago
- A command line tool that uses a Boolean calculus of calendars for computing availability (currently supports Google Calendar API)☆24Nov 3, 2021Updated 4 years ago
- A utility for merging and genotyping Illumina-style GVCFs.☆34Feb 26, 2019Updated 7 years ago
- Ximmer is a system for CNV calling on exome and targeted genomic sequencing☆19Jun 13, 2026Updated 2 months ago
- Qtip: a tandem simulation approach for accurately predicting read alignment mapping qualities☆25Oct 31, 2019Updated 6 years ago
- Documentation on new GWAS Summary Statistics Standard☆25Jun 26, 2026Updated 2 months ago