FUSE filesystem for the DNAnexus storage system
☆13Apr 24, 2026Updated last week
Alternatives and similar repositories for dxfuse
Users that are interested in dxfuse are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Create WDL documentation using Markdown.☆29Nov 25, 2025Updated 5 months ago
- WDL and CWL compiler for the DNAnexus platform☆36Updated this week
- Forensic analysis tool useful in backwards computing information from next-generation sequencing data.☆11Apr 13, 2026Updated 3 weeks ago
- WDL tools for parsing, type-checking, and more☆28Updated this week
- Bioinformatics workflows developed for and used on the St. Jude Cloud project.☆43Updated this week
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Command line utility for working with next-generation sequencing files.☆38Jun 24, 2025Updated 10 months ago
- CLI tool to manage the download of large quantities of files from DNAnexus☆19Feb 19, 2026Updated 2 months ago
- Rust crates for working with Workflow Description Language (WDL) documents.☆62Sep 23, 2025Updated 7 months ago
- DNAnexus platform client libraries☆110Updated this week
- Foundations for the Rust omics ecosystem.☆16Mar 19, 2026Updated last month
- Interactive table from gemini output☆10Mar 5, 2019Updated 7 years ago
- ClaMSA (Classify Multiple Sequence Alignments).☆13Nov 21, 2024Updated last year
- edit distance sequence tags and helpers☆12Feb 4, 2021Updated 5 years ago
- The DNAnexus incremental upload script packaged as an Ansible Role☆13Apr 7, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Workflow Description Language compiler for the DNAnexus platform☆43Jun 29, 2023Updated 2 years ago
- Library for visualising genomic features in Python.☆15May 12, 2017Updated 8 years ago
- Variant Annotation, Segregation and Exclusion for family or cohort based rare-disease sequencing studies.☆12Jun 2, 2022Updated 3 years ago
- 🧬 Viral genome reference alignment☆12Jan 26, 2021Updated 5 years ago
- localised duplicate detection on patterned flow cells☆10Feb 27, 2019Updated 7 years ago
- Lossless VCF compression☆21Mar 4, 2022Updated 4 years ago
- Percentile-normalization method for correcting batch effects in case-control studies☆12Oct 26, 2019Updated 6 years ago
- Single-Cell Sequencing Quality Control and Processing Software☆30Sep 16, 2019Updated 6 years ago
- Create "haplotype maps" of variants in order to use with Picardtools Crosscheck_Files utility, which allows for robust genotyping of func…☆28Jan 4, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A bioinformatics workflow engine built on top of the Workflow Description Language (WDL).☆156Updated this week
- A fast and flexible program to annotate/interpret genetic variants in VCF/BCF file☆21Oct 26, 2020Updated 5 years ago
- Scripts for creating a Kraken database from the Comprehensive Antibiotic Resistance Database☆10Dec 16, 2016Updated 9 years ago
- GA4GH Quality Control of Whole Genome Sequencing's metrics definition, benchmark resources and reference implementations☆23Apr 1, 2026Updated last month
- We present a customizable computational tool, PathSeq2.0, to enable the discovery and identification of microbial sequences in metagenomi…☆12Jan 20, 2018Updated 8 years ago
- LAAVA: Long-read AAV Analysis☆13Dec 9, 2025Updated 4 months ago
- Coronavirus (SARS-Cov-2) sequencing analysis☆10Oct 5, 2021Updated 4 years ago
- Lab notebook for people who like the command line.☆11Mar 6, 2026Updated last month
- A command line tool that uses a Boolean calculus of calendars for computing availability (currently supports Google Calendar API)☆24Nov 3, 2021Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A utility for merging and genotyping Illumina-style GVCFs.☆33Feb 26, 2019Updated 7 years ago
- Lazy import python modules for low start-up time. (Taken from mercurial.)☆52Jul 15, 2024Updated last year
- Ximmer is a system for CNV calling on exome and targeted genomic sequencing☆19Apr 15, 2026Updated 2 weeks ago
- A small, auxiliary index to massively improve parallel fastq parsing☆32Mar 6, 2026Updated last month
- Qtip: a tandem simulation approach for accurately predicting read alignment mapping qualities☆25Oct 31, 2019Updated 6 years ago
- Robust individual and aggregate checksums for nucleotide sequences☆17Mar 3, 2026Updated 2 months ago
- What is true, thank you, ernestly. A large variant benchmarking tool analogous to hap.py for small variants.☆36Sep 13, 2023Updated 2 years ago