ht50 / FLT3_ITD_ext
FLT3-ITD script based on in-silico extension and clustering
☆14Updated 3 years ago
Alternatives and similar repositories for FLT3_ITD_ext:
Users that are interested in FLT3_ITD_ext are comparing it to the libraries listed below
- Robust detection of clinically relevant structural and copy number variation from whole genome sequencing data☆67Updated 4 months ago
- ClassifyCNV: a tool for clinical annotation of copy-number variants☆60Updated last year
- SMN1 copy-number and sequence variant analysis from next generation sequencing data☆22Updated last year
- ☆51Updated 2 years ago
- ☆39Updated 9 months ago
- CNV screening and annotation tool☆24Updated 8 years ago
- ConsensusCruncher is a tool that suppresses errors in next-generation sequencing data by using unique molecular identifiers (UMIs) to ama…☆20Updated 2 years ago
- Create "haplotype maps" of variants in order to use with Picardtools Crosscheck_Files utility, which allows for robust genotyping of func…☆26Updated last year
- ☆45Updated 5 years ago
- CN-Learn☆29Updated 5 years ago
- Somatic variant identification from unpaired samples☆15Updated 8 years ago
- ☆23Updated last month
- QDNAseq package for Bioconductor☆49Updated 6 months ago
- ☆38Updated 11 months ago
- Concordance and contamination estimator for tumor–normal pairs☆56Updated 3 months ago
- Workflows for germline short variant discovery in WGS data. PairedEndSingleSampleWf has been superseded in Broad production by https://gi…☆56Updated 4 years ago
- Documenting usage and experience with bioinformatic tools☆41Updated 9 years ago
- Read visualizer for structural variants☆81Updated 6 years ago
- ☆15Updated last year
- ☆36Updated 3 years ago
- Microsatellite instability (MSI) detection for cfDNA samples.☆18Updated 3 years ago
- Stratification BED files from the Global Alliance for Genomics and Health (GA4GH) Benchmarking Team and the Genome in a Bottle Consortium…☆78Updated 2 years ago
- Somatic and germline variant caller for amplicon data. Recommended caller for tumor-only workflows.☆96Updated 2 years ago
- ☆24Updated 5 years ago
- A standalone end-to-end data analysis pipeline for Duplex Sequencing☆20Updated last year
- SiNVICT: Ultra-Sensitive Detection of Single Nucleotide Variants and Indels in Circulating Tumour DNA☆27Updated 4 years ago
- Benchmarking of CNV calling tools☆18Updated 5 years ago
- Snakemake-based workflow for detecting structural variants in genomic data☆79Updated 11 months ago
- This WDL pipeline implements data pre-processing and initial variant calling according to the GATK Best Practices for germline SNP and In…☆52Updated 4 years ago
- TIDDIT - structural variant calling☆73Updated last week