ht50 / FLT3_ITD_extLinks
FLT3-ITD script based on in-silico extension and clustering
☆14Updated 4 years ago
Alternatives and similar repositories for FLT3_ITD_ext
Users that are interested in FLT3_ITD_ext are comparing it to the libraries listed below
Sorting:
- ClassifyCNV: a tool for clinical annotation of copy-number variants☆67Updated 2 years ago
- Somatic and germline variant caller for amplicon data. Recommended caller for tumor-only workflows.☆98Updated 3 years ago
- QDNAseq package for Bioconductor☆52Updated last year
- A standalone end-to-end data analysis pipeline for Duplex Sequencing☆20Updated 2 years ago
- ☆53Updated 2 years ago
- WisecondorX — An evolved WISECONDOR☆105Updated 2 months ago
- Microsatellite Analysis for Normal-Tumor InStability☆76Updated 3 years ago
- Concordance and contamination estimator for tumor–normal pairs☆58Updated last year
- Robust detection of clinically relevant structural and copy number variation from whole genome sequencing data☆72Updated last year
- A suite of tools for detecting expansions of short tandem repeats☆83Updated 2 years ago
- ☆46Updated 5 years ago
- This WDL pipeline implements data pre-processing and initial variant calling according to the GATK Best Practices for germline SNP and In…☆55Updated 4 years ago
- SMN1 copy-number and sequence variant analysis from next generation sequencing data☆23Updated 2 years ago
- Detection of copy number changes in Germline/Trio/Somatic contexts in NGS data☆91Updated last month
- CN-Learn☆30Updated 5 years ago
- R Package for Non Invasive Prenatal Testing (NIPT) analysis☆43Updated 5 years ago
- Create "haplotype maps" of variants in order to use with Picardtools Crosscheck_Files utility, which allows for robust genotyping of func…☆28Updated last year
- ☆43Updated last year
- Burden testing against public controls☆50Updated last year
- ⛏ HLA predictions from NGS shotgun data☆55Updated 4 months ago
- Benchmarking of CNV calling tools☆18Updated 6 years ago
- ☆57Updated 5 years ago
- phasing and Allele Specific Expression from RNA-seq☆116Updated last year
- Phenotype driven gene prioritization for HPO☆50Updated 4 years ago
- CNV screening and annotation tool☆25Updated 8 years ago
- Website for checking a variant's SpliceAI, Pangolin, and other scores:☆27Updated last month
- SpecHLA reconstructs entire diploid sequences of HLA genes and infers LOH events. It supports HLA-A, -B, -C, -DPA1, -DPB1, -DQA1, -DQB1, …☆51Updated 2 weeks ago
- Converts snpeff annotations into MAF☆11Updated last year
- Read visualizer for structural variants☆84Updated 7 years ago
- A copy number caller for SMN1 and SMN2 to enable SMA diagnosis and carrier screening with WGS☆49Updated 2 years ago