bjhall / updLinks
Basic UPD caller
☆12Updated 4 years ago
Alternatives and similar repositories for upd
Users that are interested in upd are comparing it to the libraries listed below
Sorting:
- ☆14Updated 2 years ago
- ☆19Updated last week
- A simple observation count database☆11Updated 2 weeks ago
- Structural Variant Prediction Viewer☆35Updated 8 years ago
- Suite of tools for analysing off-target reads to find CNVs, homozygous regions, and shared haplotypes☆31Updated 4 months ago
- SMN1 copy-number and sequence variant analysis from next generation sequencing data☆23Updated last month
- Call regions of homozygosity and make tentative UPD calls☆12Updated 6 months ago
- Thousand Variant Callers Project Repository☆74Updated 6 years ago
- SiNVICT: Ultra-Sensitive Detection of Single Nucleotide Variants and Indels in Circulating Tumour DNA☆27Updated 5 years ago
- Burden testing against public controls☆50Updated last year
- Tool to annotate outfiles from ExpansionHunter and TRGT with the pathologic implications of the repeat☆37Updated 2 weeks ago
- CNV Rapid Aberration Detection And Reporting☆12Updated 4 years ago
- Bioinformatic Analysis pipeLine for SomAtic Mutations In Cancer☆57Updated last week
- What is true, thank you, ernestly. A large variant benchmarking tool analogous to hap.py for small variants.☆35Updated 2 years ago
- VVP (VAAST Variant Prioritizer) rapidly prioritizes genetic variants☆19Updated 7 years ago
- Mutation Identification Pipeline. Read the latest documentation:☆47Updated last month
- Generic human DNA variant annotation pipeline☆59Updated last year
- CLAMMS is a scalable tool for detecting common and rare copy number variants from whole-exome sequencing data.☆30Updated 4 years ago
- Method for detecting STR expansions from short-read sequencing data☆63Updated 4 years ago
- ClassifyCNV: a tool for clinical annotation of copy-number variants☆69Updated 2 years ago
- filtering trio-based genetic variants in VCFs for clinical review☆21Updated 5 years ago
- A new tool to infer sex from massively parallel sequencing data.☆17Updated 7 months ago
- Preprocessing tools for unique molecular index (UMI) sequencing reads☆31Updated 2 years ago
- for visual evaluation of read support for structural variation☆55Updated last year
- ☆35Updated 4 years ago
- Phylogeny-based Contamination Detection in Mitochondrial and Whole-Genome Sequencing Studies☆18Updated 2 years ago
- TIDDIT - structural variant calling☆78Updated 3 weeks ago
- ConsensusCruncher is a tool that suppresses errors in next-generation sequencing data by using unique molecular identifiers (UMIs) to ama…☆21Updated 3 years ago
- Example project for integrating igv.js and flask☆26Updated 7 months ago
- Concordance and contamination estimator for tumor–normal pairs☆59Updated last year