Scripts used to generate the data/figures contained in "Single Cell Transcriptomics Reveals Cell Type Specific Diversification in Human Heart Failure"
☆15Mar 10, 2023Updated 3 years ago
Alternatives and similar repositories for Atlas_of_Human_Heart_Failure_Lavine
Users that are interested in Atlas_of_Human_Heart_Failure_Lavine are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Repository for all R scripts used for the bioinformatic analyses of the mouse and human 10x Genomics Visium spatially resolved transcript…☆34Jul 13, 2024Updated 2 years ago
- analyses of scRNAseq and spatial transcriptomics dataset of developing human pancreas at multiple gestational stages☆10Jan 30, 2023Updated 3 years ago
- Transposable element expression at unique loci in single cells with CELLO-seq☆12Jun 17, 2024Updated 2 years ago
- ☆28Apr 9, 2025Updated last year
- Cross-platform data for sequencing-based spatial transcriptomics benchmarking☆13Oct 26, 2023Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆13Mar 29, 2024Updated 2 years ago
- Suite of analysis tools for spatial total RNA-sequencing☆12Aug 10, 2023Updated 2 years ago
- ☆17Oct 3, 2023Updated 2 years ago
- Code for the spatial transcriptomic paper on IPF lungs☆24Jul 18, 2024Updated 2 years ago
- Whole genome workflows☆13Nov 9, 2024Updated last year
- ☆37Oct 22, 2025Updated 9 months ago
- Trends in single cell papers☆17Sep 23, 2024Updated last year
- ☆14Jan 24, 2024Updated 2 years ago
- ☆18Nov 5, 2024Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆18May 12, 2023Updated 3 years ago
- Kinase-Substrate Enrichment Analysis (KSEA) App☆10May 2, 2017Updated 9 years ago
- ☆15Dec 19, 2022Updated 3 years ago
- 🍹This repo includes the scripts and analysis notebook for the Droplet Hi-C manuscript☆17Feb 6, 2026Updated 5 months ago
- 10x snRNA-seq study on 5 postmortem human brain regions across the reward circuitry: NAc, AMY, sACC, DLPFC, and HPC☆25Mar 26, 2026Updated 4 months ago
- Data processing and analysis scripts for our spatial profiling of embryos using seqFISH☆16Feb 10, 2023Updated 3 years ago
- SingleCell: A Python/Cython Package for Processing Single-Cell RNA-Seq Data.☆11Jan 26, 2018Updated 8 years ago
- ☆12Nov 20, 2023Updated 2 years ago
- ☆18Feb 18, 2021Updated 5 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆23Mar 29, 2023Updated 3 years ago
- ☆23Mar 22, 2023Updated 3 years ago
- Codes used in LISTA project.☆15Apr 17, 2024Updated 2 years ago
- Code accompanying the manuscript "Broad transcriptomic dysregulation across the cerebral cortex in ASD".☆13Aug 10, 2022Updated 3 years ago
- The database and API backend for ZincBind - the database of zinc binding sites☆16Apr 8, 2025Updated last year
- ☆20May 1, 2023Updated 3 years ago
- Spatiotemporal single-cell RNA sequencing of developing hearts reveals interplay between cellular differentiation and morphogenesis☆13Oct 31, 2023Updated 2 years ago
- R package for transcriptomic biological age prediction from gene expression data☆23Updated this week
- Workflow for analysis of healthy human kidney by snRNAseq and snATACseq☆25Mar 13, 2023Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- End-to-end pipeline for segmenting cell nuclei on histology slides☆16Jul 19, 2022Updated 4 years ago
- Calculates the Variant Allele Fraction of variants in VCF files☆19Nov 28, 2024Updated last year
- Snakemake pipeline for plate scATAC-seq processing☆26Dec 7, 2023Updated 2 years ago
- R tools for analysis and visualization of single-cell subclustering data☆19May 1, 2026Updated 2 months ago
- Imputation of missing values of a matrix or data.frame using iterative prediction model☆37Mar 5, 2026Updated 4 months ago
- code and dataset for spatialDWLS☆14Apr 18, 2021Updated 5 years ago
- A toolkit for analyzing architectural stripes☆23Dec 1, 2024Updated last year