☆40Jul 14, 2023Updated 2 years ago
Alternatives and similar repositories for HCA_Heart_ver2
Users that are interested in HCA_Heart_ver2 are comparing it to the libraries listed below
Sorting:
- Single-cell analytic toolbox that offers modular workflows for multi-level cellular annotation and user-friendly analysis reports☆11May 25, 2023Updated 2 years ago
- R tools for analysis and visualization of single-cell subclustering data☆17Sep 9, 2025Updated 5 months ago
- ☆13Jun 6, 2024Updated last year
- cell type specific, trait-associated gene regulation☆29Mar 31, 2025Updated 11 months ago
- Analysis pipeline for CUT&TAG data☆23Sep 2, 2020Updated 5 years ago
- ☆13Apr 27, 2022Updated 3 years ago
- omics data analysis using clusterProfiler ;)☆15Jun 6, 2024Updated last year
- ☆11Jul 18, 2025Updated 7 months ago
- ☆13Jan 24, 2024Updated 2 years ago
- Repository for codes for the HBCA paper☆42Mar 17, 2023Updated 2 years ago
- Scripts to reproduce analyses of tradeSeq paper.☆16Feb 5, 2020Updated 6 years ago
- R package to use EaSIeR to predict anti-tumor immune response from bulk RNA-seq☆15Dec 1, 2025Updated 3 months ago
- Spatiotemporal single-cell RNA sequencing of developing hearts reveals interplay between cellular differentiation and morphogenesis☆13Oct 31, 2023Updated 2 years ago
- Perturbation-response Score (PS) analysis is a method to quantify diverse perturbation responses and discover novel biological insights i…☆17Apr 20, 2024Updated last year
- Containerized workflow for analysis of human diabetic kidney disease by snRNA-seq and snATAC-seq☆16May 18, 2023Updated 2 years ago
- ☆40Jan 26, 2026Updated last month
- Reproducibility code for the manuscript: 'Inferring and perturbing cell fate regulomes in human cerebral organoids☆30Aug 8, 2023Updated 2 years ago
- Gene group activity utility functions for Scanpy☆100Dec 21, 2024Updated last year
- Vaeda method for computational doublet annotation☆18Feb 1, 2026Updated last month
- ☆16Apr 11, 2022Updated 3 years ago
- ☆47Apr 18, 2020Updated 5 years ago
- This is the official repository for the Human Cell Atlas Heart project.☆32Jul 28, 2020Updated 5 years ago
- The integration of single cell rank-based gene set enrichment analysis☆147Jan 14, 2026Updated last month
- ☆19Sep 29, 2021Updated 4 years ago
- Spatial omics analysis toolbox☆19Jul 12, 2024Updated last year
- Pan cancer summary statistics from meta analyses of UK Biobank and Kaiser GERA cohorts.☆17Jul 15, 2020Updated 5 years ago
- Paired Insertion Counting for snATAC-seq data☆19May 12, 2025Updated 9 months ago
- Deconvolution of spatial transcriptomics at single-cell resolution☆20Sep 19, 2024Updated last year
- Calculates the Variant Allele Fraction of variants in VCF files☆19Nov 28, 2024Updated last year
- Computational pipeline to process EasySci-RNA data.☆23Jan 17, 2024Updated 2 years ago
- A toolkit for analyzing architectural stripes☆20Dec 1, 2024Updated last year
- ☆10May 31, 2022Updated 3 years ago
- ☆46Jan 28, 2026Updated last month
- ☆126Jan 31, 2026Updated last month
- ☆21Mar 4, 2024Updated 2 years ago
- Code for a multimodal atlas of healthy and injured cell states and niches in the human kidney☆25Mar 7, 2024Updated last year
- ☆62Dec 8, 2025Updated 2 months ago
- 🐯 tigeR: Tumor Immunotherapy Gene Expression Data Analysis R package☆54Jan 21, 2026Updated last month
- single cell analysis of treatment naive and treated human PDAC☆25May 27, 2022Updated 3 years ago