Teichlab / HCA_Heart_ver2Links
☆35Updated last year
Alternatives and similar repositories for HCA_Heart_ver2
Users that are interested in HCA_Heart_ver2 are comparing it to the libraries listed below
Sorting:
- ☆30Updated 2 years ago
- Estimation of Single-Cell Potency with Single Cell Entropy☆40Updated 2 years ago
- Aligning gene expression trajectories of single-cell reference and query systems☆65Updated 7 months ago
- Spatial transcriptomics of heart tissue☆21Updated 2 years ago
- ☆30Updated 3 months ago
- Accurate and fast cell marker gene identification with COSG☆44Updated 2 months ago
- Construct Tumor Transition Zone Microenvironment☆43Updated 6 months ago
- ☆28Updated 3 months ago
- Unsupervised Inference of Developmental Directions for Single Cells☆21Updated last year
- Principal analysis code used in for analysis of single cell RNAseq of primary untreated colon cancer. As described in: "Spatially organiz…☆39Updated 3 years ago
- ☆27Updated 11 months ago
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆37Updated 4 years ago
- ☆48Updated last year
- ☆44Updated last year
- We describe a transcriptional reference map of human natural killer (NK) cells based on analysis of scRNA-seq data from both blood and ti…☆11Updated 7 months ago
- ☆30Updated 2 weeks ago
- Repository for all R scripts used for the bioinformatic analyses of the mouse and human 10x Genomics Visium spatially resolved transcript…☆28Updated 10 months ago
- R package for pathway analysis in scRNA-seq data☆74Updated 9 months ago
- ☆42Updated 9 months ago
- Code used to create the core and extended GBmap, including downstream analyses (cell-cell interactions, spatial transcriptomics deconvolu…☆56Updated 2 years ago
- Scripts and notebooks to reproduce all analysis from Massoni-Badosa et al. (2022)☆28Updated 4 months ago
- Clone Calling from Visium Spatial Transcriptomics of Cancer samples☆70Updated 2 years ago
- A computational method to rank and infer drug-responsive cell population towards in-silico drug perturbation using a target-perturbed gen…☆47Updated 9 months ago
- HCC single cell analysis for Alvarez, Benhammou et al.☆16Updated 3 years ago
- ☆22Updated last year
- Integration of gut cell atlases☆25Updated 3 months ago
- Code for major analyses in "Integrative spatial analysis reveals a multi-layered organization of glioblastoma" paper☆47Updated 4 months ago
- Data available at: https://www.dropbox.com/sh/jh4s57kgbb0rnxe/AABoMK466cGc1OKsOuFN10wca?dl=0 and https://nyulangone-my.sharepoint.com//g/…☆30Updated 2 years ago
- Niche Interactions and Cellular Heterogeneity in Extracellular Signaling☆52Updated last month
- Spatial Cellular Estimator for Tumors☆52Updated last week