lfranzen / spatial-lung-fibrosisLinks
Repository for all R scripts used for the bioinformatic analyses of the mouse and human 10x Genomics Visium spatially resolved transcriptomics data presented in our associated manuscript.
☆29Updated last year
Alternatives and similar repositories for spatial-lung-fibrosis
Users that are interested in spatial-lung-fibrosis are comparing it to the libraries listed below
Sorting:
- ☆31Updated last year
- Code for the spatial transcriptomic paper on IPF lungs☆20Updated last year
- ☆24Updated 2 years ago
- Code for major analyses in "Integrative spatial analysis reveals a multi-layered organization of glioblastoma" paper☆52Updated 10 months ago
- Data available at: https://www.dropbox.com/sh/jh4s57kgbb0rnxe/AABoMK466cGc1OKsOuFN10wca?dl=0 and https://nyulangone-my.sharepoint.com//g/…☆31Updated 3 years ago
- A minimal gene set characterizes multiple classes of tumor-specific TIL among different cancer types☆11Updated 8 months ago
- HCC single cell analysis for Alvarez, Benhammou et al.☆17Updated 3 years ago
- ☆12Updated last year
- sEV-containing droplet identification in scRNA-seq data (SEVtras)☆26Updated 8 months ago
- ☆22Updated 2 years ago
- Construct Tumor Transition Zone Microenvironment☆49Updated 4 months ago
- Spatial transcriptomics of heart tissue☆27Updated 3 years ago
- ☆32Updated 8 months ago
- Integration of gut cell atlases☆29Updated 3 weeks ago
- Single-Cell Inference of Class Switch Recombination☆20Updated last week
- ☆48Updated 3 months ago
- ☆31Updated 3 weeks ago
- Codes for the scPLC project☆71Updated 2 years ago
- ☆28Updated 3 weeks ago
- ☆47Updated 3 years ago
- ☆54Updated last year
- ☆52Updated last year
- ☆31Updated 3 years ago
- ☆14Updated 2 years ago
- R code used to analyze single cell PDAC data☆41Updated last year
- ☆17Updated last year
- Code used to create the core and extended GBmap, including downstream analyses (cell-cell interactions, spatial transcriptomics deconvolu…☆64Updated 2 years ago
- scRNA-seq analysis of EENT-ONB☆22Updated last year
- Single Cell Analysis Operations☆13Updated 8 months ago
- ☆37Updated 3 years ago