Xieeeee / Droplet-Hi-C
πΉThis repo includes the scripts and analysis notebook for the Droplet Hi-C manuscript
β13Updated 3 weeks ago
Alternatives and similar repositories for Droplet-Hi-C
Users that are interested in Droplet-Hi-C are comparing it to the libraries listed below
Sorting:
- DiffDomain is a statistically sound method for detecting differential TADs between conditionsβ18Updated 6 months ago
- Snakemake pipeline for plate scATAC-seq processingβ26Updated last year
- single-cell-Isoform-Sequencing-Analysis-Tools: New and powerful tools brings single-cell RNA sequencing to the Isoform level and single mβ¦β24Updated 9 months ago
- β49Updated 9 months ago
- β27Updated 3 years ago
- This is a package and a shell script for alternative polyadenylation (APA) analysis of 3' tag single-cell RNA-seq data.β19Updated 3 years ago
- β19Updated last year
- A Deep Learning-Based Model for Quantifying Transposable Elements in Single-Cell Sequencing Dataβ27Updated last month
- β24Updated 3 years ago
- Dynamic Analysis of Alternative Polyadenylation from single-cell RNA-seq (scDaPars)β15Updated 3 years ago
- Uncertainty-aware quantification of Transposable Elements expression in scRNA-seqβ17Updated last month
- β17Updated last year
- single-cell Hi-C, scHi-C, Hi-C, 3D genome, nuclear organization, tensor decompositionβ19Updated last year
- single-cell clustering based on alternative splicing landscapesβ20Updated last year
- MAnorm2 for Normalizing and Comparing ChIP-seq Samplesβ32Updated 2 years ago
- β27Updated 6 months ago
- R package of CSOmap(developingβ14Updated 3 years ago
- β33Updated last year
- SCRIP(Single Cell Regulatory network Inference using ChIP-seq) is a tool for evaluating the binding enrichment of specific TR at single-cβ¦β19Updated 10 months ago
- β12Updated 2 years ago
- β19Updated 8 months ago
- β17Updated 4 years ago
- scripts for the integrating ATAC-seq, RNA-seq and CHi-C paperβ24Updated 2 years ago
- β34Updated 2 years ago
- ROSE: RANK ORDERING OF SUPER-ENHANCERSβ47Updated 9 months ago
- β25Updated last year
- Statistically Significant loops from HiChIP dataβ43Updated last year
- β13Updated this week
- Peak caller for CUT&TAG dataβ26Updated 2 years ago
- Code repo for all analysis done for the 'Pan-cancer whole genome comparison of primary and metastatic solid tumors' study.β15Updated 2 years ago