ggjlab / scMCALinks
Mouse cell atlas
☆60Updated 5 years ago
Alternatives and similar repositories for scMCA
Users that are interested in scMCA are comparing it to the libraries listed below
Sorting:
- A tool for unsupervised projection of single cell RNA-seq data☆96Updated 4 years ago
- Data and analysis scripts for our Embryo Timecourse paper.☆68Updated 5 years ago
- A tool for removing doublets from single-cell RNA-seq data☆74Updated 4 years ago
- ☆63Updated 4 years ago
- Publication Page for Satpathy*, Granja* et al 2019☆94Updated 5 years ago
- ☆62Updated 5 years ago
- ☆68Updated last year
- Single Cell Cluster Evaluation☆94Updated 3 years ago
- scRNA-seq cell type identification☆43Updated 5 years ago
- R implementation of MULTI-seq sample classification workflow☆63Updated last year
- Pipelines for the analysis of 10x single-cell RNA-sequencing data☆59Updated 2 years ago
- An R toolkit for estimation of cell composition from bulk expression data☆74Updated last month
- R package for robust clustering of single cell RNA sequencing data☆39Updated 2 years ago
- ☆69Updated last year
- Inference of cell-cell communication from single-cell RNAseq data☆48Updated 2 months ago
- Pileup biallelic SNPs from single-cell and bulk RNA-seq data☆78Updated 3 years ago
- Accompanying code for the tutorial: Annotating single cell transcriptomic maps using automated and manual methods☆95Updated 2 years ago
- R package for Pathway RespOnsive GENe activity inference☆107Updated 2 years ago
- This resource provides the code developed in the study of Jerby-Arnon _et al. "Single-cell RNA-seq of melanoma ecosystems reveals sources…☆72Updated 6 years ago
- marker-based purification of cell types from single-cell RNA-seq datasets☆115Updated 2 months ago
- A Shiny web app for mapping datasets using Seurat v4☆132Updated 8 months ago
- Create stacked violin plot☆49Updated 3 years ago
- mutation(barcode) caller for 10x single cell data☆45Updated 5 years ago
- Processing pipeline scripts for sci-RNA-seq3 (bash, R, python)☆43Updated 4 years ago
- A comprehensive tool for processing, analyzing and visulizing single cell chromatin accessibility sequencing data☆76Updated 4 months ago
- Clone of the Bioconductor repository for the scran package.☆42Updated 10 months ago
- STARTRAC(Single T-cell Analysis by Rna-seq and Tcr TRACking)☆107Updated 2 months ago
- SCINA: A Semi-Supervised Subtyping Algorithm of Single Cells and Bulk Samples☆69Updated 3 years ago
- Cluster single cells and analyze cell clade relationships with colorful visualizations.☆45Updated 3 years ago
- Gene signature extraction and cell-identity recognition at individual cell level from single-cell RNA-seq.☆95Updated last year