ggjlab / scMCA
Mouse cell atlas
☆59Updated 5 years ago
Alternatives and similar repositories for scMCA:
Users that are interested in scMCA are comparing it to the libraries listed below
- ☆60Updated 5 years ago
- A tool for unsupervised projection of single cell RNA-seq data☆95Updated 4 years ago
- ☆60Updated 4 years ago
- R package for robust clustering of single cell RNA sequencing data☆39Updated last year
- Inference of cell-cell communication from single-cell RNAseq data☆48Updated 2 weeks ago
- A tool for removing doublets from single-cell RNA-seq data☆73Updated 4 years ago
- Clone of the Bioconductor repository for the scran package.☆41Updated 8 months ago
- simpler single cell RNAseq data clustering☆40Updated 2 months ago
- R implementation of MULTI-seq sample classification workflow☆62Updated last year
- This resource provides the code developed in the study of Jerby-Arnon _et al. "Single-cell RNA-seq of melanoma ecosystems reveals sources…☆72Updated 6 years ago
- ☆55Updated 4 years ago
- Data and analysis scripts for our Embryo Timecourse paper.☆68Updated 5 years ago
- STARTRAC(Single T-cell Analysis by Rna-seq and Tcr TRACking)☆102Updated last week
- Publication Page for Satpathy*, Granja* et al 2019☆94Updated 5 years ago
- ☆62Updated last year
- Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).☆44Updated last year
- ☆79Updated last year
- Pipeline for initial analysis of droplet-based single-cell RNA-seq data☆91Updated 2 years ago
- R package for Pathway RespOnsive GENe activity inference☆104Updated 2 years ago
- Pipelines for the analysis of 10x single-cell RNA-sequencing data☆57Updated last year
- ☆46Updated 2 years ago
- Genotype-free demultiplexing of pooled single-cell RNA-Seq, using a hidden state model for identifying genetically distinct samples withi…☆41Updated 2 years ago
- Create stacked violin plot☆46Updated 3 years ago
- mutation(barcode) caller for 10x single cell data☆44Updated 4 years ago
- A comprehensive tool for processing, analyzing and visulizing single cell chromatin accessibility sequencing data☆76Updated last month
- Pileup biallelic SNPs from single-cell and bulk RNA-seq data☆77Updated 2 years ago
- scRNA-seq cell type identification☆44Updated 5 years ago
- Mollecular Functional Portraits☆40Updated last year
- Gene signature extraction and cell-identity recognition at individual cell level from single-cell RNA-seq.☆94Updated last year
- Detect doublets in single-cell RNA-seq data☆38Updated 5 years ago