SushiLab / omrgc_v2_scripts
☆11Updated 9 months ago
Related projects ⓘ
Alternatives and complementary repositories for omrgc_v2_scripts
- Set of utilities on sequences and BAM files☆25Updated 3 years ago
- ☆21Updated 4 years ago
- Fast and accurate Average Genome Size and 16S rRNA gene Average Copy Number computation in metagenomic data☆14Updated 3 years ago
- ☆10Updated 3 years ago
- ☆10Updated last year
- ALDEx tool to examine compositional high-throughput sequence data with Welch's t-test☆12Updated 5 years ago
- A shiny package for microbiome functional enrichment analysis☆36Updated 3 weeks ago
- ☆20Updated 7 years ago
- Dadaist2 🟨 Highway to R☆13Updated 9 months ago
- Processing support for Greengenes2☆12Updated last year
- SynTracker is a pipeline, designated to determine the biological relatedness of conspecific strains (microbial strains of the same specie…☆25Updated last week
- Pipeline for metagenome and metatranscriptome joint assembly☆18Updated last year
- Step-wise assembly of the neonatal virome modulated by breast feeding.☆11Updated 3 years ago
- Please use mmgenome2 instead. Tools for extracting individual genomes from metagenomes☆27Updated 7 years ago
- ☆23Updated last year
- ☆25Updated 2 months ago
- Reproducible scripts and notebooks for 2019 paper on population genetics in metagenomes☆15Updated 4 years ago
- scripts for microbiome analysis☆11Updated 3 months ago
- ☆12Updated 7 years ago
- Prophage Activity Estimator☆26Updated 5 months ago
- A containerized bioinformatics pipeline for viral metagenomic data analysis☆25Updated 3 months ago
- Scripts and resources for analyzing sequence data for select eco-functional genes☆19Updated 7 years ago
- MetaSNV, a metagenomic SNV calling pipeline.☆20Updated 2 years ago
- MAG Circularization Method☆33Updated 2 years ago
- A machine learning-based tool for predicting metabolic modules in incomplete bacterial genomes.☆16Updated 3 weeks ago
- Phylogeny Enhanded Prediction of PAN-genome☆39Updated 4 years ago
- This is a comprehensive database for fast and accurately analyzing the phosphorus cycling genes.☆29Updated 2 years ago
- MiCoP is a method for high-accuracy profiling of viral and fungal metagenomic communities.☆14Updated 2 years ago
- cognac: COre GeNe Alignment Concatenation☆9Updated 3 years ago
- Scripts to quality control for metagenomic raw data, including removing the adapters, low quality reads, bases or PCR duplicates☆18Updated 4 years ago