Dix-seq: An integrated pipeline for fast amplicon data analysis
☆11Dec 9, 2024Updated last year
Alternatives and similar repositories for dix-seq
Users that are interested in dix-seq are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Set of scripts to manupulate tab-delimited genotype calls files as well as to convert calls-files to other popular formats.☆10Jan 11, 2021Updated 5 years ago
- ☆25Apr 13, 2026Updated 6 months ago
- An Neural Networks based QSAR Model and a Connector to SSD☆10Sep 29, 2017Updated 9 years ago
- Automated taxonomy decoration onto a tree☆19Jul 16, 2026Updated 3 months ago
- Fast and robust identificaiton of antibiotic resistance genes (ARGs) from microbial genomes and metagenome assemblies using ARGfams, a hi…☆11Dec 30, 2022Updated 3 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- A high-performance in-silico PCR tool for primer matching and product extraction from FASTA and GenBank sequences.☆19Feb 25, 2026Updated 8 months ago
- ☆14Mar 18, 2023Updated 3 years ago
- fastx-utils using klib☆19Sep 1, 2020Updated 6 years ago
- A convenient pipeline for processing of multi-strain bacterial RNA-Seq experiments☆11Dec 1, 2020Updated 5 years ago
- USEARCH中文帮助文档(USEARCH Chinese manual)☆23Aug 1, 2024Updated 2 years ago
- A nextflow pipeline for performing bacterial RNA-Seq data analysis☆14Oct 15, 2026Updated 2 weeks ago
- Takes excel file output from qPCR (Quantstudio3, ABI) and sample labels. Optionally analyzes standard curves and plots CT, Tms and absolu…☆12Jul 25, 2025Updated last year
- Interactive tool for investigating coverage gaps in eDNA metabarcoding reference databases for marine, freshwater, and elasmobranch fis…☆10Mar 9, 2026Updated 7 months ago
- Argo: species-resolved profiling of antibiotic resistance genes in complex metagenomes through long-read overlapping☆17Aug 24, 2026Updated 2 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Transcript specific RNA splicing events lookup☆10Jun 22, 2026Updated 4 months ago
- LTER Metacommunity Synthesis Working Group☆10May 9, 2023Updated 3 years ago
- 👩🏫 Linear Models, ANOVA, and Regression Analysis with R - taught in autumn 2022; 🛠️ R, basic statistics, correlation, regression, ANC…☆12Jul 10, 2024Updated 2 years ago
- ☆14Mar 8, 2021Updated 5 years ago
- ☆13Mar 25, 2022Updated 4 years ago
- Artemis is a group dedicated to developing the Artemis Game Engine for C# 4.5+ and MonoGame.☆12Nov 19, 2015Updated 10 years ago
- BIO9905MERG1 – Bioinformatics for Environmental Sequencing (DNA metabarcoding)☆11Apr 9, 2023Updated 3 years ago
- Repo for a Microbiome Protocol☆10Apr 26, 2018Updated 8 years ago
- rdiversity - An R package for measuring similarity-sensitive diversity☆11Jul 16, 2026Updated 3 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Spatio-temporal trends in habitat suitability from ecological niche models☆16Feb 4, 2026Updated 8 months ago
- This is a read-only mirror of the CRAN R package repository. rgdal — Bindings for the 'Geospatial' Data Abstraction Library. Homepage: …☆13Jun 1, 2023Updated 3 years ago
- Phylogenetic tools for Eco-phylogenetics☆16Oct 10, 2024Updated 2 years ago
- A user-friendly tool to screen antimicrobial resistance in fungal genomes☆21May 8, 2026Updated 5 months ago
- SparCC is a Python module for calculating correlations in compositional data☆34Sep 30, 2026Updated 3 weeks ago
- Bioinformatics pipeline for the analysis of amplicon sequencing data of eDNA samples from the PacMAN project☆12Feb 26, 2026Updated 8 months ago
- Extended tools for correlation analysis and visualization.☆46Mar 19, 2020Updated 6 years ago
- R implementation of the LEfSe method☆68May 14, 2026Updated 5 months ago
- R package for Ecological Networks utility functions and metrics☆11Aug 3, 2026Updated 2 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- An ultra-fast and accurate tool for KEGG Orthology (KO) assignment, powered by deep learning.☆25Aug 24, 2026Updated 2 months ago
- Code behind re-development of online ScotPHO profiles shiny app☆11Updated this week
- ☆10Jan 8, 2024Updated 2 years ago
- Communities Assembly by Traits: Individuals and beyond☆13Jul 1, 2026Updated 3 months ago
- ☆12Aug 6, 2026Updated 2 months ago
- Model and predicts species accounting for their known trophic interaction network☆19Jun 24, 2024Updated 2 years ago
- Python package for conversions between ENSEMBL IDs and gene names (annotables + pyensembl)☆12Feb 2, 2026Updated 8 months ago