☆15Sep 14, 2021Updated 4 years ago
Alternatives and similar repositories for phase-separation
Users that are interested in phase-separation are comparing it to the libraries listed below
Sorting:
- DeePhase predictor of homotypic liquid-liquid phase separation of proteins & the code associated with the paper "Learning the molecular g…☆19Dec 30, 2021Updated 4 years ago
- An interpretable machine learning algorithm to predict disordered protein phase separation based on biophysical interactions☆13Aug 2, 2022Updated 3 years ago
- Accurate prediction of protein intrinsic disorder and its functions using graph-based interaction protein language model☆24Aug 20, 2024Updated last year
- 🍹This repo includes the scripts and analysis notebook for the Droplet Hi-C manuscript☆15Feb 6, 2026Updated 3 weeks ago
- A machine-learning algorithm to predict CTCF-mediated long-range chromatin interactions☆17Nov 7, 2018Updated 7 years ago
- Long disorder consensus predictor☆18Sep 2, 2025Updated 6 months ago
- Critical Assessment of Intrinsic Disorder☆14Aug 11, 2025Updated 6 months ago
- ChromBERT: A pre-trained foundation model for context-specific transcription regulatory network☆18Dec 29, 2025Updated 2 months ago
- ☆19Aug 29, 2025Updated 6 months ago
- DiffDomain is a statistically sound method for detecting differential TADs between conditions☆17Jun 27, 2025Updated 8 months ago
- ☆19Apr 7, 2025Updated 10 months ago
- ☆27Apr 14, 2024Updated last year
- localCIDER - sequence analysis tool for disordered protein sequences☆24May 15, 2023Updated 2 years ago
- Next generation sequence parameter library for proteins☆38Feb 18, 2026Updated 2 weeks ago
- Predicts if Protein will reside in the protein corona on the surface of engineered nanomaterials☆12Jun 21, 2022Updated 3 years ago
- Code used in article "Uncovering the transcriptional regulatory network involved in boosting wheat regeneration and transformation".☆12Mar 21, 2023Updated 2 years ago
- DeepG4: A deep learning approach to predict active G-quadruplexes☆14May 31, 2022Updated 3 years ago
- The ChIP-Seq peak calling algorithm using convolution neural networks☆15Jan 18, 2021Updated 5 years ago
- ☆12Feb 16, 2025Updated last year
- [CVPR2025] Official code for Lost in Translation Found in Context☆23Jan 14, 2026Updated last month
- 3DGB is a workflow to build 3D models of genomes from HiC data☆13Jan 26, 2026Updated last month
- ☆13Sep 14, 2021Updated 4 years ago
- inferring sequence-structure motifs using deep learning☆40Aug 3, 2023Updated 2 years ago
- Transcriptional regulatory network inference from gene expression and prior information with LASSO-StARS☆15May 3, 2022Updated 3 years ago
- Computational analyses of WGS, mate-pair, RNA-seq, Hi-C and Capture-C data from highly rearranged balancer chromosomes in Drosophila mela…☆10Sep 25, 2019Updated 6 years ago
- Python library for identification and masking of low-complexity regions in nucleotide sequences☆10Jan 23, 2026Updated last month
- RIESLING: Super-enhancer identification. (Rapid Identification of EnhancerS LInked to Nearby Genes)☆10Jun 28, 2018Updated 7 years ago
- 生物信息学的画图代码☆12Apr 11, 2023Updated 2 years ago
- ☆10Aug 7, 2024Updated last year
- ☆13Jul 17, 2024Updated last year
- ☆12Dec 15, 2020Updated 5 years ago
- [ICCV 2025] Official code for the paper "Simulating Dual-Pixel Images From Ray Tracing For Depth Estimation"☆17Jan 4, 2026Updated 2 months ago
- ASimulatoR: splice-aware RNA-seq data simulation https://doi.org/10.1093/bioinformatics/btab142☆11Sep 6, 2022Updated 3 years ago
- Joint normalization of multiple Hi-C matrices, visualization and detection of differential chromatin interactions, supporting covariates.☆10Apr 22, 2022Updated 3 years ago
- Code for TAD_SV project☆11Mar 16, 2022Updated 3 years ago
- The main repository for ACTIVA: realistic single-cell RNA-seq generation with automatic cell-type identification using introspective vari…☆10Jan 23, 2023Updated 3 years ago
- Interpretable bimodal network for transcription factors binding site prediction☆10Jun 29, 2023Updated 2 years ago
- Notebooks for CPA figures☆14Dec 9, 2022Updated 3 years ago
- ☆12Aug 2, 2020Updated 5 years ago