Alternatives and similar repositories for phase-separation

Users that are interested in phase-separation are comparing it to the libraries listed below

• kadiliissaar / DeePhase
  DeePhase predictor of homotypic liquid-liquid phase separation of proteins & the code associated with the paper "Learning the molecular g…
  ☆16Updated 3 years ago
• antigenomics / tcren-ms
  📝 [Paper] TCRen: predicting TCR-peptide recognition based on residue-level pairwise statistical potential
  ☆18Updated last month
• bioinformatics-sannio / ncrna-deep
  Scripts and datasets to reproduce the experiment of the paper "Exploring non-coding RNA functions with deep learning tools"
  ☆15Updated 4 years ago
• piercelab / tcrmodel2
  ☆40Updated last month
• idrblab / AnnoPRO
  Feature map and function annotation of Proteins
  ☆33Updated 11 months ago
• Lee-CBG / ATM-TCR
  ☆9Updated last year
• lulab / OligoFormer
  ☆24Updated last week
• Abalign / Abalign
  A visualization software for antibody multi sequence alignment
  ☆18Updated 11 months ago
• samsledje / philharmonic
  Decoding the functional networks of non-model organisms
  ☆11Updated last month
• JiangBioLab / DLpTCR
  Predicting immunogenic peptide recognized by TCR through ensemble deep learning
  ☆15Updated last year
• X-lab-3D / PANDORA
  MODELLER-based, anchor restrained, Peptide-MHC Modelling pipeline
  ☆20Updated 2 weeks ago
• WrightLabScience / EvoWeaver-ExampleCode
  Associated code for EvoWeaver publication
  ☆12Updated this week
• IdoSpringer / ERGO-II
  ERGO-II, an updated version of ERGO including more features for TCR-peptide binding prediction
  ☆32Updated 3 years ago
• weizhongli / cdhit-web-server
  ☆20Updated 2 years ago
• patrickbryant1 / SpeedPPI
  Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning
  ☆84Updated last year
• TencentAILabHealthcare / SC-AIR-BERT
  ☆9Updated 2 years ago
• haiyuan-yu-lab / PIONEER
  ☆25Updated 4 months ago
• BioComputingUP / MobiDB-lite
  Long disorder consensus predictor
  ☆13Updated 2 months ago
• schumacherlab / STAPLER
  STAPLER (Shared TCR And Peptide Language bidirectional Encoder Representations from transformers) is a language model that uses a joint T…
  ☆26Updated 3 weeks ago
• MIDIfactory / AlphaFastPPi
  Fast AlphaFold-Multimer based pipeline for Protein-Protein Interaction (PPI) screening
  ☆36Updated 7 months ago
• frankligy / DeepImmuno
  Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity
  ☆68Updated 2 years ago
• JinsenLi / deepDNAshape
  A method to predict DNA shape features considering farther flanking region.
  ☆31Updated 7 months ago
• lyjps / Struct2GO
  Struct2GO:protein function prediction based on Graph pooling algorithm and AlphaFold2 structure information
  ☆27Updated last year
• VariantEffect / mavedb-api
  MaveDB API
  ☆13Updated this week
• tymor22 / tm-vec
  ☆68Updated 7 months ago
• steineggerlab / colabfold-protocol
  ColabFold protocol
  ☆50Updated 7 months ago
• GfellerLab / MixMHC2pred
  HLA-II ligand predictor.
  ☆43Updated 2 years ago
• KULL-Centre / _2022_functional-sites-cagiada
  ☆22Updated last year
• pmoris / ImRex
  Generic TCR-epitope recognition prediction using CNN approach on both known and novel epitopes
  ☆16Updated last year
• phbradley / TCRdock
  python tools for TCR:peptide-MHC modeling and analysis
  ☆75Updated last year