TheJacksonLaboratory / basic-browserLinks
☆12Updated 5 years ago
Alternatives and similar repositories for basic-browser
Users that are interested in basic-browser are comparing it to the libraries listed below
Sorting:
- ☆59Updated 4 months ago
- ChIA-PIPE: A fully automated pipeline for comprehensive ChIA-PET data analysis and visualization☆29Updated 4 years ago
- REDItools are python scripts to investigate RNA editing at genomic scale.☆68Updated 4 months ago
- Dynamics analysis of Alternative PolyAdenylation from RNA-seq☆63Updated 2 years ago
- perl cworld module and collection of utility/analysis scripts for C data (3C, 4C, 5C, Hi-C)☆67Updated 6 years ago
- A method for circular DNA detection based on probabilistic mapping of ultrashort reads☆66Updated last year
- ☆50Updated 7 years ago
- HiC uniform processing pipeline☆61Updated 2 years ago
- tools to find circRNAs in RNA-seq data☆44Updated 8 years ago
- scripts for analyzing the CVDC data.☆20Updated 5 years ago
- A Perl/R pipeline for plotting metagenes☆37Updated 4 years ago
- an efficient Hi-C data processing pipeline☆17Updated last year
- release version☆54Updated 3 years ago
- DiffDomain is a statistically sound method for detecting differential TADs between conditions☆17Updated 4 months ago
- Pipeline of time-ordered gene coexpression network (TO-GCN) construction from three-dimensional (gene expression, condition, and time) da…☆52Updated 2 years ago
- optimization of ribosome P-site positioning in ribosome profiling data☆55Updated 8 months ago
- Estimate locus specific human LINE-1 expression.☆39Updated 2 weeks ago
- Package for analysis and characterization of differential TADs☆26Updated 3 years ago
- ☆31Updated 2 years ago
- toolbox for analysing BS-seq data, advance features in SNV, ASM and DMR☆64Updated last year
- SpecHLA reconstructs entire diploid sequences of HLA genes and infers LOH events. It supports HLA-A, -B, -C, -DPA1, -DPB1, -DQA1, -DQB1, …☆51Updated last month
- ☆63Updated 2 months ago
- The snakemake analysis workflow for bioinformatics☆25Updated last year
- A list of alternative splicing analysis resources☆46Updated 7 months ago
- A pipeline to process m6A-seq data and down stream analysis.☆45Updated 5 years ago
- A tool for the calculation of RNA-editing index for RNA seq data☆45Updated 3 weeks ago
- A computational workflow for exitron splicing identification☆12Updated last year
- Fit-Hi-C is a tool for assigning statistical confidence estimates to chromosomal contact maps produced by genome-wide genome architecture…☆91Updated 3 years ago
- Pipeline for Somatic Variant Calling with WES and WGS data☆24Updated last year
- A computation framework for genome-wide detection of enhancer-hijacking events from chromatin interaction data in re-arranged genomes☆75Updated 2 years ago