Pathway-Level Single-Cell Functional Profiling of Individual Patient Samples
☆11Aug 6, 2025Updated last year
Alternatives and similar repositories for CellSpectra
Users that are interested in CellSpectra are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆15Sep 23, 2025Updated last year
- scType goes spatial: ScType enables fast and accurate cell type identification from spatial transcriptomics data☆12Jul 11, 2024Updated 2 years ago
- Deconvolution of spatial transcriptomics at single-cell resolution☆23Mar 25, 2026Updated 7 months ago
- SIDISH: Semi-supervised Iterative Deep Learning for Identifying Single-cell High-risk Populations☆26Jul 30, 2026Updated 2 months ago
- Implementation of MaSigPro for scRNA-Seq Data☆20Updated this week
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆14Jun 1, 2026Updated 4 months ago
- An R package for fast topic inference to identify tissue architecture in multiplexed images☆18Jun 5, 2026Updated 4 months ago
- ☆15Jul 21, 2025Updated last year
- ☆20Jan 23, 2026Updated 9 months ago
- NaRnEA (Nonparametric analytical Rank-based Enrichment Analysis)☆12Mar 2, 2023Updated 3 years ago
- A tool for identifying Phenotype-Associated cell Subpopulations from single-cell sequencing data by integrating bulk data☆20Jan 16, 2026Updated 9 months ago
- remove single cells Doublets by integrating tools!☆21Jun 3, 2022Updated 4 years ago
- ☆19May 25, 2026Updated 5 months ago
- ☆17Jul 13, 2024Updated 2 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- scOntoMatch is an R package which unifies ontology annotation of scRNA-seq datasets to make them comparable across studies☆11Oct 27, 2023Updated 2 years ago
- Computational pipeline to process EasySci-RNA data.☆23Jan 17, 2024Updated 2 years ago
- A computational framework☆20Jul 23, 2026Updated 3 months ago
- Supplementary information for "Population-level comparisons of gene regulatory networks modeled on high-throughput single-cell transcript…☆11Jan 15, 2024Updated 2 years ago
- Tool comparison for detecting differentially expressed individual transposable elements☆12Jan 7, 2022Updated 4 years ago
- Transposable element expression at unique loci in single cells with CELLO-seq☆12Jun 17, 2024Updated 2 years ago
- scPair: Boosting single cell multimodal analysis by leveraging single cell atlases and implicit feature selection☆13Sep 8, 2025Updated last year
- ☆14Sep 1, 2026Updated last month
- ☆10Mar 12, 2023Updated 3 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- ☆20Aug 25, 2026Updated 2 months ago
- R tools for analysis and visualization of single-cell subclustering data☆19Aug 28, 2026Updated last month
- ☆22Jul 7, 2026Updated 3 months ago
- ☆29Jun 4, 2023Updated 3 years ago
- DEGAS is an R package that can be used to prioritize cells in relation to disease.☆14Nov 6, 2024Updated last year
- ☆17Dec 4, 2025Updated 10 months ago
- ☆66Aug 6, 2025Updated last year
- Network analyses of single cell-based digital twins for personalized treatment of inflammatory disease☆17Mar 23, 2024Updated 2 years ago
- ☆14Jun 11, 2023Updated 3 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- mapping somatic variants to cell barcodes in scRNA-Seq data☆11Sep 21, 2026Updated last month
- Fast and Scalable Single Cell Differential Expression Analysis using Mixed-effects Models☆14Apr 8, 2026Updated 6 months ago
- sEV-containing droplet identification in scRNA-seq data (SEVtras)☆27Feb 22, 2025Updated last year
- Probability Model of Accessible Chromatin of Single cells☆11Aug 14, 2026Updated 2 months ago
- Scaling up spatial transcriptomics for large-sized tissues: uncovering cellular-level tissue architecture beyond conventional platforms☆51Oct 22, 2025Updated last year
- Awesome GRN enhanced AnnData toolkit☆13Feb 19, 2026Updated 8 months ago
- R package for scMultiMap, a statistical method for cell-type-specific mapping of enhancer-gene pairs with single-cell multimodal data☆10Jun 12, 2025Updated last year