Alternatives and similar repositories for RNAcode:

Users that are interested in RNAcode are comparing it to the libraries listed below

• IARCbioinfo / alignment-nf
  Whole Exome/Whole Genome Sequencing alignment pipeline
  ☆28Updated 4 months ago
• appris / appris
  Annotating principal splice isoforms
  ☆14Updated 3 months ago
• hsinnan75 / GSAlign
  GSAlign: an ultra-fast sequence alignment algorithm for intra-species genome comparison
  ☆53Updated 8 months ago
• bioforensics / pytaxonkit
  Python bindings for the TaxonKit library
  ☆34Updated 2 weeks ago
• BioinformaticsToolsmith / MeShClust2
  MeShClust2: Application of alignment-free identity scores in clustering long DNA sequences
  ☆14Updated 3 years ago
• schatzlab / biomedicalresearch2021
  Course Materials for EN.601.452 / AS.020.415 Computational Biomedical Research & Advanced Biomedical Research
  ☆13Updated 3 years ago
• Benson-Genomics-Lab / IRF
  Inverted Repeats Finder: a program to analyze DNA and RNA sequences
  ☆13Updated last year
• bcgsc / physlr
  Construct a Physical Map from Linked Reads
  ☆18Updated 9 months ago
• pinellolab / CRISPRme
  ☆18Updated last month
• kamimrcht / CARNAC-LR
  ☆15Updated 5 years ago
• thekaplanlab / msabrowser
  🧬 MSABrowser: dynamic and fast visualization of sequence alignments, variations, and annotations
  ☆31Updated 8 months ago
• pinellolab / CRISPRitz
  Tool package to perform in-silico CRISPR analysis and assessment
  ☆22Updated 8 months ago
• cpockrandt / PhyloCSFpp
  PhyloCSF++ computes PhyloCSF tracks for whole-genome multiple sequence alignments, scores single MSA, annotates CDS features in GFF/GTF f…
  ☆30Updated 2 years ago
• ablab / rnaquast
  Quality assessment of de novo transcriptome assemblies from RNA-Seq data
  ☆20Updated 2 months ago
• KHP-Informatics / DNAscanv2
  DNAscan2 is a fast and efficient bioinformatics pipeline that allows for the analysis of DNA Next Generation sequencing data, requiring v…
  ☆14Updated 8 months ago
• iqbal-lab-org / minos
  Variant call adjudication
  ☆16Updated 7 months ago
• NDBL / HECIL
  Hybrid Error Correction of Long Reads using Iterative Learning
  ☆10Updated 6 years ago
• linsalrob / genbank_to
  Convert genbank files to a swath of other formats
  ☆14Updated last year
• brentp / fraguracy
  overlapping bases in read-pairs from a fragment indicate accuracy and reveal error-prone sites
  ☆32Updated 2 weeks ago
• sestaton / Transposome
  A toolkit for annotation of transposable element families from unassembled sequence reads
  ☆30Updated last year
• EvolBioInf / fur
  Find Unique genomic Regions
  ☆29Updated last week
• lh3 / sdust
  Symmetric DUST for finding low-complexity regions in DNA sequences
  ☆34Updated last year
• shendurelab / MetaPhase
  The software involved in the MetaPhase project, as described in G3 (http://dx.doi.org/10.1534/g3.114.011825)
  ☆16Updated 6 years ago
• shenwei356 / ictv-taxdump
  NCBI-style taxdump files for International Committee on Taxonomy of Viruses (ICTV)
  ☆20Updated 6 months ago
• fawaz-dabbaghieh / PanPA
  PanPA is a tool for building panproteome graphs and aligning sequences back to the graphs.
  ☆12Updated 2 months ago
• soedinglab / BaMMmotif2
  Bayesian Markov Model motif discovery tool version 2 - An expectation maximization algorithm for the de novo discovery of enriched motifs…
  ☆13Updated 3 years ago
• salzberg-lab / Balrog
  Bacterial Annotation by Learned Representation of Genes
  ☆54Updated 3 years ago
• tlawrence3 / FAST
  FAST: Fast Analysis of Sequences Toolbox
  ☆31Updated 5 years ago
• rcedgar / palmdb
  Database of virus RdRP barcode sequences
  ☆15Updated 6 months ago
• bionitio-team / bionitio-python
  Demonstrating best practices for bioinformatics command line tools
  ☆26Updated 4 years ago