☆17Mar 3, 2023Updated 3 years ago
Alternatives and similar repositories for MiPepid
Users that are interested in MiPepid are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- GenomeThreader gene prediction software.☆14Nov 10, 2025Updated 10 months ago
- TreeBeST: Tree Building guided by Species Tree☆14Feb 17, 2011Updated 15 years ago
- A tool for accurately detecting actively translating ORFs from Ribo-seq data☆43Feb 14, 2026Updated 7 months ago
- An R interface to the omixer-rpm for turning metagenomic functional profiles into pathway/module profiles☆12Dec 16, 2022Updated 3 years ago
- iDeepV: predicting RBP binding sites using vector representation learned from sequences with a CNN.☆10Jul 16, 2019Updated 7 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- A comprehensive analysis tool for Ribo-seq and small RNA-seq data☆10Jun 22, 2020Updated 6 years ago
- SCAPP is a plasmid assembly tool. This tool is described in our paper: https://microbiomejournal.biomedcentral.com/articles/10.1186/s4016…☆39Feb 26, 2023Updated 3 years ago
- Fast and sensitive discovery of complete phages and prophages in bacterial genome sequences☆23Dec 16, 2024Updated last year
- Automatically exported from code.google.com/p/qsimscan☆14Oct 10, 2021Updated 4 years ago
- ☆16May 7, 2023Updated 3 years ago
- GERP++ code from Sidow Lab modified by Kevin Thornton to compile properly.☆25Sep 19, 2016Updated 10 years ago
- Integration ribosome profiling - mass spectrometry☆15Nov 4, 2025Updated 10 months ago
- Annotate sequences from BLAST against KEGG DB with KO numbers and summarize them in KEGG modules.☆23Dec 27, 2018Updated 7 years ago
- Energy-guided binder design pipeline built on BindCraft☆19Jun 6, 2025Updated last year
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- ☆22Oct 4, 2023Updated 2 years ago
- ☆10Mar 19, 2020Updated 6 years ago
- 🔬🐛 Rapid 16s rRNA identification from isolate FASTQ files☆25Apr 24, 2018Updated 8 years ago
- BLAST-Like Alignment Tool☆23Jan 11, 2019Updated 7 years ago
- Chromatin Accessibility Prediction via Convolutional Long Short-Term Memory Networks with k-mer Embedding☆15Nov 5, 2018Updated 7 years ago
- Pipeline for identifying viral integration and fusion mRNA reads from NGS data. Manuscript is currently in preparation.☆30Jul 13, 2021Updated 5 years ago
- MGKit: Metagenomics Framework☆15Oct 31, 2022Updated 3 years ago
- Convert GFF file to GenBank file format while extracting the sequences between the annotated regions☆14Sep 6, 2023Updated 3 years ago
- Compute strain abundance in a defined microbial community☆10Jul 27, 2023Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆13Jun 17, 2023Updated 3 years ago
- ☆39Updated this week
- ORFFinder in Python☆14Aug 24, 2024Updated 2 years ago
- Cell2location paper - Comprehensive mapping of tissue cell architecture via integrated single cell and spatial transcriptomics☆15Nov 26, 2022Updated 3 years ago
- ☆13Aug 14, 2020Updated 6 years ago
- ☆23May 8, 2023Updated 3 years ago
- Transcription Factor Co-Occurrence using Market Basket analysis☆20Jul 7, 2025Updated last year
- ☆11Feb 9, 2024Updated 2 years ago
- epiTCR: a highly sensitive predictor for TCR–peptide binding☆16Aug 15, 2025Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆22May 7, 2026Updated 4 months ago
- simple and not slow ORF caller☆24Apr 7, 2026Updated 5 months ago
- ☆16Sep 20, 2022Updated 3 years ago
- Annotation and Prediction of Oncogenic Gene Fusions in RNAseq☆12Feb 20, 2016Updated 10 years ago
- GitHub template repository for creating new barebones Nextflow pipelines, using the Arcadia-Science/nextflow-template cookiecutter templa…☆13Mar 21, 2023Updated 3 years ago
- High throughput python tool for mining and analysis of gene duplications.☆17Jul 30, 2026Updated last month
- Antigen-receptor Design Against Peptide-MHC Targets☆22Jan 9, 2026Updated 8 months ago