🔎 wheeler graph recognition algorithm, visualization and generation
☆21Jun 28, 2026Updated 2 months ago
Alternatives and similar repositories for Wheeler_Graph_Toolkit
Users that are interested in Wheeler_Graph_Toolkit are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Gapless, reference-quality Southern Han Chinese genome assembly and annotation☆12Oct 24, 2022Updated 3 years ago
- 👶🏼🍼 a RPG game modified from a unity 2D game kit☆22Sep 20, 2023Updated 2 years ago
- ✂️ Deep learning-based splice site predictor that improves spliced alignments☆61Jul 29, 2026Updated last month
- 🚀 LiftOn: Accurate annotation mapping for GFF/GTF across assemblies☆128Aug 24, 2026Updated last week
- 📊 An R package of RNA-seq workflow☆16May 4, 2022Updated 4 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- 🤖 Open‑source deep-learning-based splice‑site predictor that decodes splicing patterns across species☆49Jul 30, 2026Updated last month
- your friendly pangenome graph genotyper☆10Feb 6, 2023Updated 3 years ago
- Simultaneous multi-sample transcript assembler for RNA-seq data☆17Dec 13, 2024Updated last year
- ☆17Aug 8, 2025Updated last year
- convert CHAIN format to PAF format☆15Dec 17, 2024Updated last year
- A plant organellar Graphical Fragment Assembly toolkit☆16Sep 10, 2025Updated 11 months ago
- ☆15Nov 30, 2023Updated 2 years ago
- CPANG19 - Computational PANGenomics (2019)☆12May 7, 2020Updated 6 years ago
- functions to analyse sanger sequencing reads in R☆107May 6, 2026Updated 3 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Iterative error correction of long reads☆13Dec 9, 2022Updated 3 years ago
- ☆14Dec 26, 2025Updated 8 months ago
- Robust individual and aggregate checksums for nucleotide sequences☆18Mar 3, 2026Updated 6 months ago
- Population genetics analysis on VG☆17Apr 22, 2021Updated 5 years ago
- Materials for EN.601.449/649 Computational Genomics: Applied Comparative Genomics☆30Sep 9, 2024Updated last year
- metagenome population recombination rate estimation pipeline☆12Nov 23, 2025Updated 9 months ago
- Programs implementing the trio-binning genome assembly method☆22Nov 22, 2023Updated 2 years ago
- MONI: A Pangenomic Index for Finding MEMs☆38Mar 25, 2025Updated last year
- reference free variant assembly☆34Jul 14, 2023Updated 3 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- chloroplast genome assembly using long reads data☆17Jul 8, 2025Updated last year
- ☆11Feb 21, 2023Updated 3 years ago
- run-length BWT tools for genomic sequences☆19May 19, 2022Updated 4 years ago
- BWT tunneling☆12Feb 4, 2018Updated 8 years ago
- Efficient low-divergence mapping of long reads in minimizer space☆70Oct 7, 2023Updated 2 years ago
- Unfazed by genomic variant phasing☆29May 26, 2024Updated 2 years ago
- ClusterV: finding HIV quasispecies and drug resistance from ONT sequencing data☆12Jan 7, 2025Updated last year
- convert variation graph alignments to coverage maps over nodes☆28Jan 21, 2026Updated 7 months ago
- Shared k-mer content between two genomes☆18Jun 21, 2023Updated 3 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- A Python package for landscape genomic simulation☆13Dec 15, 2025Updated 8 months ago
- Reference bias measuring toolkit☆20Mar 12, 2026Updated 5 months ago
- A pipeline for assemble chroloplast genome using short/long reads☆11Mar 31, 2022Updated 4 years ago
- Visualization toolkit for differential splicing events☆21Apr 19, 2026Updated 4 months ago
- CONNET: Accurate Genome Consensus in Assembling Nanopore Sequencing Data via Deep Learning☆11Oct 28, 2022Updated 3 years ago
- An optimal space run-length Burrows-Wheeler transform full-text index☆70May 31, 2023Updated 3 years ago
- [mu]tation [s]pectrum [h]istory [i]nference☆27Aug 26, 2026Updated last week