This is the repository accompanying the pre-print titled, "Genome-wide analyses of 200,453 individuals yield new insights into the causes and consequences of clonal hematopoiesis" (https://www.medrxiv.org/content/10.1101/2022.01.06.22268846v1).
☆13Jun 9, 2022Updated 3 years ago
Alternatives and similar repositories for clonal-hematopoiesis
Users that are interested in clonal-hematopoiesis are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Haplotype-aware Hidden Markov Models for detecting CNVs from bulk RNA-seq☆13Apr 2, 2024Updated last year
- ASCETIC (Agony-baSed Cancer EvoluTion InferenCe) is a novel framework for the inference of a set of statistically significant temporal pa…☆12Apr 18, 2025Updated 11 months ago
- Separating the direct effects of risk factors for atherosclerotic cardiovascular disease from those mediated by type 2 diabetes☆18Mar 12, 2023Updated 3 years ago
- Tutorial for running Mendelian Randomization analysis using R☆34Apr 29, 2024Updated last year
- Repository for RecallME-v.0.1 a variant calling pipelines benchmarker and optimizer☆13Dec 18, 2023Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- this repository contains the code (not the data and the results) to reproduce the paper : Impact of the gut microbiota and associated met…☆15Jun 3, 2022Updated 3 years ago
- Connecting GWAS summary data to analytical tools☆23Mar 25, 2024Updated 2 years ago
- Tools to gather evidence for structural variation via breakpoint detection.☆20Mar 2, 2026Updated 3 weeks ago
- Variant to disease dataset workflows for Open Targets Genetics☆13Aug 23, 2022Updated 3 years ago
- Algorithm to implement Fraction and Allelic Copy number Estimate from Tumor/normal Sequencing using unmatched normal sample(s) for log ra…☆12Sep 15, 2023Updated 2 years ago
- ☆17Jul 13, 2024Updated last year
- processes GoT amplicon data and generates a table of metrics☆32Jun 24, 2022Updated 3 years ago
- Estimate Bias Due To Sample Overlap In Mendelian Randomization Studies☆11Sep 1, 2022Updated 3 years ago
- Computational identification of targets for CAR-T cell therapy in AML☆21Dec 25, 2022Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- R package for epigraphdb☆28Jul 6, 2024Updated last year
- A JBrowse plugin for creating sashimi or junction style plots from RNA-seq data☆14Apr 30, 2021Updated 4 years ago
- Analysis code for Olink CVD1 - HF analysis☆15Aug 14, 2024Updated last year
- This is a repository of the scLinaX R package developed in the Tomofuji et al (Quantification of escape from X chromosome inactivation wi…☆10Sep 12, 2025Updated 6 months ago
- ☆17May 21, 2025Updated 10 months ago
- Workflow to reproduce results and figures for the second BeatAML manuscript☆15Jun 28, 2022Updated 3 years ago
- Fitting latent factor mixed models☆13Jun 12, 2020Updated 5 years ago
- Python package for cancer early detection based on a model of cancer evolution and circulating tumor DNA (ctDNA) shedding☆13Jan 8, 2021Updated 5 years ago
- 🐶 hlabud: HLA genotype analysis in R☆17Apr 11, 2025Updated 11 months ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- This repository contains scripts to identify healthy and malignant cells from scRNAseq with CloneTracer and process data from Optimized 1…☆26Oct 17, 2024Updated last year
- ☆10Apr 17, 2023Updated 2 years ago
- ☆14May 25, 2018Updated 7 years ago
- GWAS genetics Fine-mapping method☆17May 17, 2024Updated last year
- This code relates to the project titled "Assessing the causal role of epigenetic clocks in the development of multiple cancers: a Mendeli…☆14Nov 22, 2021Updated 4 years ago
- Search for activating regulatory variants in the tumor genome☆14Apr 11, 2025Updated 11 months ago
- The effect of metabolic traits on oral and oropharyngeal cancer risk: a Mendelian randomization analysis☆12Apr 19, 2023Updated 2 years ago
- Basic and fast GWAS functions for QQ and Manhattan plots (incl. gene names)☆33Feb 10, 2026Updated last month
- Cloud-based molecular docking for everyone☆12Jul 1, 2024Updated last year
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Ethnicity Annotation from Whole-Exome and Targeted Sequencing Data☆17Mar 18, 2023Updated 3 years ago
- A statistical test of pleiotropic effect of a genetic variant on two traits using GWAS summary statistics☆39Sep 18, 2025Updated 6 months ago
- Human Endometrial Cell Atlas (HECA). An integrated single-cell reference atlas of the human endometrium.☆31Jun 19, 2024Updated last year
- An R package for visualising cell-cell interactions☆46Mar 16, 2026Updated 2 weeks ago
- ☆22Apr 28, 2022Updated 3 years ago
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆42May 2, 2018Updated 7 years ago
- MMQTL is a statistical package applying meta-analysis to detect multiple QTL signals integrating signals among conditions, with control f…☆12Apr 3, 2025Updated 11 months ago