dzhakparov / GeneSelectRLinks
☆19Updated last year
Alternatives and similar repositories for GeneSelectR
Users that are interested in GeneSelectR are comparing it to the libraries listed below
Sorting:
- Analysis and visualization of RNA-Seq results☆29Updated 3 weeks ago
- The Spatial Splicing-derived Neoantigen Identifier Pipeline (SSNIP) allows for the precise characterization of neoantigens derived from c…☆19Updated 2 months ago
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Updated 3 years ago
- scripts for the integrating ATAC-seq, RNA-seq and CHi-C paper☆24Updated 2 years ago
- ☆23Updated 2 years ago
- ☆20Updated last year
- A p-value-free method for controlling false discovery rates in high-throughput biological data with two conditions☆39Updated 2 years ago
- A R script to perform clustering of gene expression time-series RNA-seq data with Mfuzz.☆20Updated 6 years ago
- SCASA: Single cell transcript quantification tool☆21Updated last year
- Example of run CytoSig and reproduce prediction results on bulk and single-cell cohorts☆12Updated last year
- Combined mutation recurrence and functional impact to identify coding and non-coding cancer drivers☆15Updated 6 years ago
- Code repo for all analysis done for the 'Pan-cancer whole genome comparison of primary and metastatic solid tumors' study.☆16Updated 2 years ago
- NeoFuse is a user-friendly pipeline for the prediction of fusion neoantigens from tumor RNA-seq data.☆19Updated 2 years ago
- ☆10Updated last month
- Time-Course Multi-Omics data integration☆25Updated last year
- Snakemake pipeline for running MAJIQ☆23Updated last year
- Immune Cell Gene Signatures for Profiling the Microenvironment of Solid Tumours☆27Updated 4 years ago
- SpaceX: Gene Co-expression Network Estimation for Spatial Transcriptomics☆19Updated 2 years ago
- omics data analysis using clusterProfiler ;)☆13Updated last year
- ☆28Updated last year
- A networks analysis pipeline for RNASeq time series data☆14Updated 4 years ago
- Batch Correction and Adaptive Contrast Calling in Complex RNA-seq Experimental Designs Using DESeq2☆15Updated last month
- Pipeline to analyze long-read mRNA isoforms and ORF products sequenced in breast cancer using PacBio Single-Molecule technology.☆16Updated 3 years ago
- ☆12Updated 3 years ago
- HTCA Analysis Tools☆6Updated 2 years ago
- An R package for Splice-aware quantification of translation using Ribo-seq data☆19Updated last year
- A tool kit for dissecting cancer evolution from multi-region derived tumor biopsies via somatic mutations☆36Updated 3 years ago
- Snakemake pipeline for benchmarking cell-type deconvolution methods and deconvolving real bulk RNA-seq data with the use of scRNA-seq dat…☆15Updated last month
- Advanced steps of the OSCA book☆13Updated 2 months ago
- R Shiny application for cross omics data analysis. In revision with Bioinformatics Adv.☆30Updated 2 weeks ago