dzhakparov / GeneSelectRLinks
☆19Updated last year
Alternatives and similar repositories for GeneSelectR
Users that are interested in GeneSelectR are comparing it to the libraries listed below
Sorting:
- Analysis and visualization of RNA-Seq results☆30Updated last month
- ☆25Updated 3 years ago
- ☆17Updated 2 years ago
- The Spatial Splicing-derived Neoantigen Identifier Pipeline (SSNIP) allows for the precise characterization of neoantigens derived from c…☆20Updated 5 months ago
- ☆20Updated 2 years ago
- Code related to scRNA analysis using the scAmpi workflow☆27Updated 3 months ago
- Immune Cell Gene Signatures for Profiling the Microenvironment of Solid Tumours☆27Updated 4 years ago
- Example of run CytoSig and reproduce prediction results on bulk and single-cell cohorts☆14Updated 2 years ago
- QBRC Neoantigen calling pipeline with CSiN calculation embedded☆24Updated 3 years ago
- A collection of perl scripts for NGS analysis☆16Updated last year
- ☆11Updated 11 months ago
- Combined mutation recurrence and functional impact to identify coding and non-coding cancer drivers☆15Updated 6 years ago
- xOmicsShiny: an R Shiny application for cross-omics data analysis and pathway mapping, Bioinformatics Advances, Volume 5, Issue 1, 2025, …☆33Updated 2 months ago
- GEfetch2R - Access Single-cell/Bulk RNA-seq Data from Public Repositories and Benchmark the Subsequent Format Conversion Tools☆37Updated 6 months ago
- RADAR is devised to detect and visualize all possible twelve-types of RNA editing events from RNA-seq datasets.☆20Updated last month
- Methods and analysis for Garcia-Nieto, et al. Somatic mutations☆16Updated 5 years ago
- A R script to perform clustering of gene expression time-series RNA-seq data with Mfuzz.☆22Updated 6 years ago
- This repository aims to serve as an index of the work described at Salmen & De Jonghe et. al 2022☆23Updated 3 years ago
- SpaceX: Gene Co-expression Network Estimation for Spatial Transcriptomics☆19Updated 2 years ago
- ☆13Updated 4 years ago
- Easy and comprehensive biological network reconstruction and analysis☆32Updated 3 weeks ago
- ☆17Updated last year
- A pipeline for identifying indel derived neoantigens using RNA-Seq data☆30Updated 3 years ago
- Code for the manuscript "Single-cell analysis of human primary prostate cancer reveals the heterogeneity of tumor-associated epithelial c…☆24Updated 3 years ago
- Pseudotime Analysis for Bulk Data☆17Updated last year
- BingleSeq - A user-friendly R package for Bulk and Single-cell RNA-Seq data analyses☆22Updated 4 years ago
- Analysis pipeline for our circSC manuscript☆14Updated 3 years ago
- ☆10Updated 4 months ago
- Pipeline to analyze long-read mRNA isoforms and ORF products sequenced in breast cancer using PacBio Single-Molecule technology.☆16Updated 3 years ago
- Pipeline to call neoantigens from intron retention events derived from RNA-Seq data.☆28Updated 4 years ago