ATaRVa - Analysis of Tandem Repeat Variation
☆25Sep 3, 2026Updated 2 weeks ago
Alternatives and similar repositories for ATaRVa
Users that are interested in ATaRVa are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A short tandem repeat (STR) genotyping and analysis toolkit for long reads☆22Updated this week
- Error correction of long reads☆16Jan 30, 2026Updated 7 months ago
- Tandem repeat genotyping with long reads☆40Sep 23, 2025Updated 11 months ago
- tandemtwister: Tandem repeat genotyping tool☆22Feb 1, 2026Updated 7 months ago
- Tandem repeat genotyping from long reads☆28Sep 13, 2026Updated last week
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A structural variant filtering and prioritization tool for long-read sequencing data☆45Aug 26, 2026Updated 3 weeks ago
- Topsicle utilizes abundance of telomere pattern k-mers to estimate telomere length in long read.☆22Mar 2, 2026Updated 6 months ago
- Short Tandem Repeat disease loci resource☆29Updated this week
- A Rust library for storing generic genomic data by sorted chromosome name☆18Sep 26, 2024Updated last year
- Toolkit for VNTR genotyping and repeat-pan genome graph construction☆36Aug 18, 2025Updated last year
- Misassembly Identifier☆27Sep 5, 2026Updated 2 weeks ago
- ☆17Mar 17, 2023Updated 3 years ago
- What is true, thank you, ernestly. A large variant benchmarking tool analogous to hap.py for small variants.☆37Sep 13, 2023Updated 3 years ago
- Variant Calling for the HPRC2☆17May 26, 2026Updated 3 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Tandem Repeats Caller for LOng Reads☆17May 28, 2021Updated 5 years ago
- PhenoSV: Interpretable phenotype-aware model for the prioritization of genes affected by structural variants.☆18Feb 11, 2025Updated last year
- Structural Variants Assessment Based on Haplotype-resolved Assemblies☆22Apr 28, 2023Updated 3 years ago
- PERF is an Exhaustive Repeat Finder☆33Apr 22, 2021Updated 5 years ago
- Kmer Analysis of Pileups for Genotyping☆41Jul 16, 2026Updated 2 months ago
- Targeted genotyper for complex polymorphic genes☆47Updated this week
- Improved structural variant discovery in accurate long reads using sample-specific strings (SFS)☆49Apr 20, 2026Updated 5 months ago
- ☆42Jan 14, 2026Updated 8 months ago
- De novo tandem repeat calling from PacBio HiFi data☆19Dec 5, 2025Updated 9 months ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- AlfaPang builds pangenome graphs without alignments or references.☆17Nov 7, 2025Updated 10 months ago
- SV analysis of the long-read sequencing data of the 1019 samples of the 1KG-ONT panel☆39Mar 25, 2026Updated 5 months ago
- ☆24Feb 22, 2023Updated 3 years ago
- ☆29Aug 15, 2026Updated last month
- Non-parametric structural variant genotyper☆15Nov 18, 2021Updated 4 years ago
- VCF files of SVs using long-read sequencing (LRS).☆22Dec 17, 2021Updated 4 years ago
- ☆14Oct 17, 2024Updated last year
- Tools to gather evidence for structural variation via breakpoint detection.☆20Mar 27, 2026Updated 5 months ago
- ☆20May 8, 2026Updated 4 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- A command-line interface for Sentieon pipelines☆16Sep 13, 2026Updated last week
- Genome-wide TR catalog and variation clusters described in [Weisburd, Dolzhenko, et al. 2024]☆20Updated this week
- An Fast variant calling tool to detection germline and somatic variants☆12Feb 21, 2026Updated 6 months ago
- Nanopore sequencing-based episignature detection☆18Jun 10, 2026Updated 3 months ago
- Tool for drawing gene structures from genome annotation files.☆22Jun 20, 2026Updated 3 months ago
- fastVEP: High-performance Variant Effect Predictor in Rust☆149Updated this week
- Fast and exact gap-affine partial order alignment☆71Updated this week