VNTR annotation using motif selection
☆42Apr 23, 2026Updated this week
Alternatives and similar repositories for vamos
Users that are interested in vamos are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆40Jan 14, 2026Updated 3 months ago
- Structural Variants Assessment Based on Haplotype-resolved Assemblies☆21Apr 28, 2023Updated 3 years ago
- Copy number caller for long read data including SNV utilization☆69Mar 31, 2025Updated last year
- ☆12Apr 18, 2022Updated 4 years ago
- Toolkit for VNTR genotyping and repeat-pan genome graph construction☆33Aug 18, 2025Updated 8 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Pipeline to convert a haploid assembly into diploid☆111Jan 23, 2025Updated last year
- Phased assembly variant caller☆139Dec 4, 2024Updated last year
- R integration for edlib, a C/C++ library for pairwise sequence alignment using edit distance (Levenshtein distance).☆11Jul 20, 2025Updated 9 months ago
- ☆102Apr 22, 2024Updated 2 years ago
- Tandem repeat genotyping and visualization from PacBio HiFi data☆136Dec 8, 2025Updated 4 months ago
- ☆10Mar 4, 2025Updated last year
- ☆128Apr 18, 2026Updated last week
- Functions to compare a SV call sets against a truth set.☆31Jun 18, 2025Updated 10 months ago
- Parakit is a tool to analyze the RCCX module, which contain the CYP21A2 gene, using long sequencing reads.☆14Apr 6, 2026Updated 3 weeks ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- SV analysis of the long-read sequencing data of the 1019 samples of the 1KG-ONT panel☆39Mar 25, 2026Updated last month
- Evaluating genome assemblies☆119Mar 3, 2026Updated last month
- Reference-based variant calling pipeline for a pair of phased haplotype assemblies☆109Jun 6, 2021Updated 4 years ago
- A complete diploid human genome☆145Mar 27, 2026Updated last month
- Improved structural variant discovery in accurate long reads using sample-specific strings (SFS)☆49Apr 20, 2026Updated last week
- Jasmine: SV Merging Across Samples☆250Dec 20, 2024Updated last year
- SV calling for diploid assemblies☆31Mar 22, 2024Updated 2 years ago
- VACmap: a long-read aligner specifically designed for complex structural variation discovery☆63Apr 17, 2026Updated last week
- General purpose utility related to GAF files☆29Updated this week
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- ☆44Sep 10, 2024Updated last year
- Kmer Analysis of Pileups for Genotyping☆39Mar 6, 2026Updated last month
- ☆20Mar 13, 2026Updated last month
- STRspy: a novel alignment and quantification-based state-of-the-art method, short tandem repeat (STR) detection calling tool designed spe…☆18Apr 6, 2026Updated 3 weeks ago
- linearize and simplify variation graphs using blocked partial order alignment☆62Mar 31, 2026Updated last month
- NanoRepeat: fast and accurate analysis of Short Tandem Repeats (STRs) from Oxford Nanopore sequencing data☆19Jan 13, 2026Updated 3 months ago
- GFAffix identifies walk-preserving shared affixes in variation graphs and collapses them into a non-redundant graph structure.☆37May 29, 2025Updated 11 months ago
- ☆67Apr 9, 2024Updated 2 years ago
- Improved Phased Assembler☆28Mar 11, 2022Updated 4 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- The Modular Aligner and The Modular SV Caller☆47Jul 18, 2023Updated 2 years ago
- Split a BAM file by haplotype support☆16Dec 13, 2017Updated 8 years ago
- A Rust library for storing generic genomic data by sorted chromosome name☆17Sep 26, 2024Updated last year
- Tandem Repeats Caller for LOng Reads☆17May 28, 2021Updated 4 years ago
- PacBio BAM C++ library☆20Aug 14, 2023Updated 2 years ago
- Long read aligner☆114May 26, 2023Updated 2 years ago
- ☆14Sep 11, 2023Updated 2 years ago