jianhong / ChIPpeakAnno
☆11Updated last week
Related projects ⓘ
Alternatives and complementary repositories for ChIPpeakAnno
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆36Updated 2 years ago
- A bioconductor package with minimalist design for drawing elegant tracks or lollipop plot☆66Updated this week
- ☆38Updated 3 years ago
- Tutorial Website☆53Updated 3 years ago
- A Perl/R pipeline for plotting metagenes☆35Updated 3 years ago
- Updated DANPOS2 to work with python3☆20Updated 8 months ago
- Scripts to import your FeatureCounts output into DEXSeq☆30Updated 6 years ago
- 4C-seq processing pipeline☆22Updated 6 months ago
- Genomic Association Tester☆29Updated last year
- Demultiplexes a fastq.☆44Updated 3 years ago
- A package for quantifying transposable elements at a locus level for RNAseq datasets.☆24Updated 2 months ago
- perl cworld module and collection of utility/analysis scripts for C data (3C, 4C, 5C, Hi-C)☆64Updated 5 years ago
- IDR☆30Updated last year
- RNA editing tests☆16Updated 4 years ago
- RepEnrich is a method to estimate repetitive element enrichment using high-throughput sequencing data.☆26Updated 2 years ago
- Bioinformatic Analysis pipeLine for SomAtic Mutations In Cancer☆45Updated this week
- An R interface to the MEME Suite☆46Updated last month
- ENCODE long read RNA-seq pipeline☆44Updated last year
- For biological deep sequencing data. Decompose a UCSC knownGenes/Ensembl GTF file into transcript regions (i.e. exons, introns, UTRs and…☆33Updated last year
- ☆17Updated 5 years ago
- A modular, containerized pipeline for ATAC-seq data processing☆54Updated last month
- A toolset for profiling alternative splicing events in RNA-Seq data.☆78Updated 3 months ago
- Pipelines to create and analyze ENCODE candidate cis-Regulatory Elements☆19Updated 3 weeks ago
- Arabidopsis RNA_-seq downstream analysis shiny app☆31Updated 5 years ago
- Software to compute reproducibility and quality scores for Hi-C data☆43Updated 5 years ago
- GREAT Analysis - Functional Enrichment on Genomic Regions☆85Updated 3 months ago
- Detection of differential translated genes using Ribo-seq☆14Updated 3 years ago
- ☆53Updated 3 years ago
- Analysis of gene expression and splicing diversity in a subset of samples from the 1000 Genomes Project, including eQTL and sQTL discover…☆32Updated 3 months ago