☆17Feb 15, 2026Updated 2 weeks ago
Alternatives and similar repositories for COTAN
Users that are interested in COTAN are comparing it to the libraries listed below
Sorting:
- Cluster Identity Predictor (R package implementation)☆21Mar 8, 2022Updated 3 years ago
- Correlation-Based Feature Selection for Single-Cell RNA Sequencing Data☆20Jul 19, 2022Updated 3 years ago
- ☆14Aug 5, 2022Updated 3 years ago
- ☆25Aug 1, 2022Updated 3 years ago
- R package for normalisation of spatial transcriptomics data☆17Jan 21, 2026Updated last month
- ☆19Dec 1, 2021Updated 4 years ago
- SpatialCorr: Identify gene sets with spatially varying correlation☆18Jan 2, 2024Updated 2 years ago
- A statistical simulator for rational scRNA-seq experimental design☆12Dec 14, 2020Updated 5 years ago
- R tools for analysis and visualization of single-cell subclustering data☆17Sep 9, 2025Updated 5 months ago
- ☆41Apr 5, 2021Updated 4 years ago
- code for 'Cell Types of Origin of the Cell Free Transcriptome' by Vorperian et al☆17Feb 22, 2022Updated 4 years ago
- Automatic selection of number of principal components☆17Jun 27, 2022Updated 3 years ago
- CaDRReS-Sc is a framework for analyzing drug response heterogeneity based on single-cell RNA-seq data☆18May 7, 2022Updated 3 years ago
- An R implementation of the Gene Frequency - Inverse Cell Frequency method for single cell data normalization☆18Aug 29, 2023Updated 2 years ago
- Create stacked violin plot☆51Mar 2, 2022Updated 4 years ago
- Flexible, probablistic metrics for quality control of scRNA-seq data☆21Jan 4, 2023Updated 3 years ago
- R/BioC package to estimate the cell composition of whole blood in DNA methylation samples in microarray or sequencing platforms☆18Nov 26, 2025Updated 3 months ago
- Matrix factorization model for interpreting single cell gene expression in biologically heterogeneous data☆22Mar 25, 2024Updated last year
- BulkSignalR☆27Jul 24, 2025Updated 7 months ago
- Covarying neighborhood analysis (CNA) is a method for finding structure in- and conducting association analysis with multi-sample single-…☆57Jun 1, 2025Updated 9 months ago
- Interoperability between SpatialData and the Xenium Explorer☆25Jul 31, 2024Updated last year
- ☆26May 16, 2025Updated 9 months ago
- Individual level Differential Expression Analysis for Single cells☆26Dec 24, 2022Updated 3 years ago
- ☆34Apr 15, 2025Updated 10 months ago
- Bayesian Logistic Regression with Hyper-LASSO priors☆10Dec 14, 2025Updated 2 months ago
- R package for detection of cell-cell interaction using Non-negative Tensor Decomposition☆34Jun 19, 2025Updated 8 months ago
- interactive plots for differential expression analysis☆34Jun 19, 2025Updated 8 months ago
- Transcription Factor Enrichment Analysis☆36Dec 8, 2025Updated 2 months ago
- ☆32May 19, 2019Updated 6 years ago
- Ressources for Boinformatics Trainings☆12Nov 20, 2023Updated 2 years ago
- Analysis pipeline for processing paired-end Illumina reads obtained after ancient mtDNA target enrichment capture.☆11Mar 27, 2020Updated 5 years ago
- R package for Bioconductor submission☆38Dec 8, 2022Updated 3 years ago
- Course material for CB2030☆13Feb 18, 2026Updated last week
- characterizing spatial gene expression heterogeneity in spatially resolved single-cell transcriptomics data with nonuniform cellular dens…☆86Jun 7, 2022Updated 3 years ago
- post-clustering differential expression test☆36May 28, 2019Updated 6 years ago
- Estimate locus specific human LINE-1 expression.☆39Jan 19, 2026Updated last month
- R package for the recount2 project. Documentation website: http://leekgroup.github.io/recount/☆41Dec 12, 2024Updated last year
- LaTeX template of graduate Thesis [University of Chinese Academy of Sciences]☆12Nov 7, 2017Updated 8 years ago
- Network analyses of single cell-based digital twins for personalized treatment of inflammatory disease☆13Mar 23, 2024Updated last year