SchulzLab / ORNA
Fast in-silico normalization algorithm for NGS data
☆22Updated 3 years ago
Alternatives and similar repositories for ORNA:
Users that are interested in ORNA are comparing it to the libraries listed below
- Population-scale detection of non-reference sequence variants using colored de Bruijn Graphs☆24Updated 10 months ago
- ☆15Updated 7 years ago
- CAMSA: a tool for Comparative Analysis and Merging of Scaffold Assemblies☆24Updated 4 years ago
- Annotated Genome Optimization Using Transcriptome Information☆19Updated 4 years ago
- A simple tool to fix PacBio fasta/q that was not properly split into subreads☆14Updated 3 years ago
- transposable element typing pipeline☆17Updated last year
- fastq quality assessment and filtering tool☆18Updated 2 years ago
- Scaffolding with assembly likelihood optimization☆21Updated 4 years ago
- Improved Phased Assembler☆28Updated 3 years ago
- A comparative genome scaffolding tool☆17Updated 6 years ago
- SAMsift: advanced filtering and tagging of SAM/BAM alignments using Python expressions.☆23Updated 7 years ago
- An algorithm for centromere assembly using long error-prone reads☆26Updated 3 years ago
- Tandem Repeats Finder: a program to analyze DNA sequences☆14Updated 2 years ago
- R package and wrapper functions for identifying serial structural variations from genome assemblies☆27Updated 6 months ago
- ☆32Updated 2 years ago
- Simultaneous multi-sample transcript assembler for RNA-seq data☆17Updated 3 months ago
- OrthoFiller: Identifying missing annotations for evolutionarily conserved genes.☆22Updated 2 years ago
- Read nanopore sequence reads in real-time☆14Updated 8 years ago
- Haplotype-aware genome assembly toolkit☆29Updated 5 years ago
- In-depth characterization and annotation of differences between two sets of DNA sequences☆60Updated 4 years ago
- genomic alignment similarity search tool☆18Updated 9 months ago
- Kmer based genotyper for short reads.☆23Updated 3 years ago
- Method to optimally select samples for validation and resequencing☆27Updated 3 years ago
- kASA - k-Mer Analysis of Sequences based on Amino acid-like encoding☆23Updated last year
- Identifying repeats in high-throughput sequencing data☆15Updated 11 months ago
- Pipeline for structural variant image curation and analysis.☆48Updated 3 years ago
- WGS (Wheat) Robust Assembly Pipeline☆22Updated 3 years ago
- TideHunter: efficient and sensitive tandem repeat detection from noisy long reads using seed-and-chain☆20Updated 9 months ago
- A framework for extracting telomeric reads from single-molecule sequencing experiments, describing their sequence variation and motifs, a…☆15Updated last year
- Segmental duplication detection tool☆13Updated 2 years ago