mourisl / RcorrectorLinks
Error correction for Illumina RNA-seq reads
☆67Updated last year
Alternatives and similar repositories for Rcorrector
Users that are interested in Rcorrector are comparing it to the libraries listed below
Sorting:
- Protein hint generation pipeline for gene finding in eukaryotic genomes☆60Updated last year
- PacBio hybrid error correction through iterative short read consensus☆61Updated 6 years ago
- Generates an NCBI .tbl file of annotations on a genome.☆68Updated 7 years ago
- Assembly statistic visualisation☆90Updated last year
- Best practices and workflow for genome annotation☆77Updated 4 months ago
- Tools for working with second gen assemblies, fasta sequences, etc☆93Updated 8 years ago
- 🔗Genome assembly scaffolder using minimizer graphs☆85Updated 10 months ago
- Dotplot large Genomes in an Interactive, Efficient and Simple way☆108Updated 2 weeks ago
- convert various features into a GFF-like file for use in genome browsers☆72Updated last month
- A fork of exonerate: a generic tool for sequence alignment☆70Updated last year
- High throughput protein function annotation with Human Readable Description (HRDs) and Gene Ontology (GO) Terms.☆67Updated 2 years ago
- My collection of light bioinformatics analysis pipelines for specific tasks☆75Updated last year
- dnaPipeTE (for de-novo assembly & annotation Pipeline for Transposable Elements), is a pipeline designed to find, annotate and quantify T…☆58Updated 2 years ago
- Simple bacterial assembly and annotation pipeline☆75Updated 3 weeks ago
- A tool for generating bacterial genomes from metagenomes with nanopore long read sequencing☆70Updated 4 years ago
- Same species annotation lift over pipeline.☆98Updated 2 years ago
- Software for clustering de novo assembled transcripts and counting overlapping reads☆72Updated 3 years ago
- Recentrifuge: robust comparative analysis and contamination removal for metagenomics☆96Updated 3 months ago
- Genome scaffolding based on HiC data in heterozygous and high ploidy genomes☆60Updated 7 months ago
- ⛓ Long Interval Nucleotide K-mer Scaffolder☆75Updated 4 months ago
- Visualize whole genome alignments as linear maps☆73Updated 3 weeks ago
- Fast and pretty dotplots for whole genomes assemblies using minimap and R/ggplot2☆76Updated 8 years ago
- Lima - Demultiplex Barcoded PacBio Samples☆66Updated 3 months ago
- Automatically exported from code.google.com/p/prottest3☆37Updated 7 years ago
- PHAST☆74Updated last week
- A collection of scripts for processing fastq files in ways to improve de novo transcriptome assemblies, and for evaluating those assembli…☆50Updated last year
- Synteny Imager☆64Updated last month
- A EXPERIMENTAL fork of minimap2 optimized for assembly-to-reference alignment☆88Updated 4 years ago
- Python programs for processing GFF3 files☆99Updated last year
- A post sequencing QC tool for Oxford Nanopore sequencers☆100Updated last month