EBI-Metagenomics / mettannotatorLinks
☆79Updated this week
Alternatives and similar repositories for mettannotator
Users that are interested in mettannotator are comparing it to the libraries listed below
Sorting:
- A toolkit for prokaryotic comparative genomics☆51Updated last week
- BEAV: Bacterial Element Annotation reVamped☆70Updated 2 months ago
- Fast and accurate tool for calculating Average Nucleotide Identity (ANI) and clustering virus genomes and metagenomes☆91Updated 5 months ago
- zol (& fai): large-scale targeted detection and evolutionary investigation of gene clusters (i.e. BGCs, phages, etc.)☆63Updated 2 weeks ago
- Program to quickly and accurately assemble plasmids in hybrid and long-only sequenced bacterial isolates☆77Updated last month
- Metagenomics-related extended functionalities to samtools☆22Updated 2 years ago
- GTDB taxonomy taxdump files with trackable TaxIds☆55Updated 6 months ago
- ☆62Updated last year
- A toolkit for exploring prokaryotic methylation and base modifications in nanopore sequencing☆50Updated last month
- Precise host read removal☆107Updated last month
- A tool for drawing ANI clustermap between all-vs-all microbial genomes☆85Updated 5 months ago
- GenoVi, an automated customizable circular genome visualizer for bacteria and archaea☆97Updated 2 years ago
- A tool for classifying prokaryote protein sequences into COG(Cluster of Orthologous Genes) functional category☆73Updated 5 months ago
- A tool for generating bacterial genomes from metagenomes with nanopore long read sequencing☆69Updated 4 years ago
- Bacterial GWAS analysis☆45Updated 3 months ago
- ARG normalization by mapping to the ARO ontology.☆59Updated 2 months ago
- An R package designed for drawing gene arrow maps☆91Updated 3 weeks ago
- A curated list of phage related software and computational resources for phage scientists, bioinformaticians and enthusiasts.☆50Updated 3 years ago
- Predict the function of phage hypothetical proteins using an LSTM model trained with Phage Synteny☆54Updated 4 months ago
- Follow up to Grace Blackwell's 661k dataset, for 2023☆124Updated 2 months ago
- A modular end-to-end suite for in silico recovery, clustering, and analysis of prokaryotic, microeukaryotic, and viral genomes from metag…☆97Updated 2 weeks ago
- PATO is a R package designed to analyze pangenomes (set of genomes) intra or inter species.☆62Updated 2 years ago
- A Python package for obtaining complete lineages and the lowest common ancestor (LCA) from a set of taxonomic identifiers☆50Updated 8 months ago
- Python code for versatile Functional Ontology Assignments for Metagenomes searching via Hidden Markov Model (HMM) with environmental focu…☆63Updated last week
- IS mapping software☆56Updated 3 years ago
- EzAAI - High Throughput Prokaryotic AAI Calculator☆44Updated 2 months ago
- Tool to estimate genome quality of microbial eukaryotes☆38Updated 2 months ago
- 🦠🧬🧑💻📇 Microbial genomes-to-report pipeline☆72Updated last month
- Pipelines used in the lab.☆14Updated 7 months ago
- ☆59Updated last year