EBI-Metagenomics / mettannotatorLinks
☆81Updated last month
Alternatives and similar repositories for mettannotator
Users that are interested in mettannotator are comparing it to the libraries listed below
Sorting:
- A toolkit for prokaryotic comparative genomics☆51Updated 3 months ago
- GTDB taxonomy taxdump files with trackable TaxIds☆57Updated 8 months ago
- GenoVi, an automated customizable circular genome visualizer for bacteria and archaea☆101Updated 2 years ago
- BEAV: Bacterial Element Annotation reVamped☆73Updated 4 months ago
- zol (& fai): large-scale targeted detection and evolutionary investigation of gene clusters (i.e. BGCs, phages, etc.)☆71Updated last week
- Fast and accurate tool for calculating Average Nucleotide Identity (ANI) and clustering virus genomes and metagenomes☆95Updated 7 months ago
- Program to quickly and accurately assemble plasmids in hybrid and long-only sequenced bacterial isolates☆83Updated last week
- ☆65Updated last year
- Tool to estimate genome quality of microbial eukaryotes☆38Updated 5 months ago
- tiara – a tool for DNA sequence classification☆74Updated last year
- Predict the function of phage hypothetical proteins using an LSTM model trained with Phage Synteny☆57Updated 7 months ago
- ARG normalization by mapping to the ARO ontology.☆62Updated 5 months ago
- A tool for generating bacterial genomes from metagenomes with nanopore long read sequencing☆68Updated 4 years ago
- Precise host read removal☆112Updated 4 months ago
- An R package designed for drawing gene arrow maps☆95Updated 3 months ago
- A toolkit for exploring prokaryotic methylation and base modifications in nanopore sequencing☆52Updated last month
- Metagenomics-related extended functionalities to samtools☆22Updated 2 years ago
- EzAAI - High Throughput Prokaryotic AAI Calculator☆45Updated 5 months ago
- A pipeline to computationally identify invertible DNA regions and quantify their orientations.☆31Updated 2 years ago
- Python code for versatile Functional Ontology Assignments for Metagenomes searching via Hidden Markov Model (HMM) with environmental focu…☆63Updated last month
- Bacterial GWAS analysis☆46Updated this week
- Improvement of metagenome-assembled genomes☆54Updated 5 years ago
- scripts for estimating bacteria replication rates based on population genome copy number variation☆73Updated 6 years ago
- A tool to raise the quality of viral genomes assembled from short-read metagenomes via resolving and joining of contigs fragmented during…☆82Updated 4 months ago
- All of my various bioinformatic scripts fit for public consumption (loosely defining "fit")☆80Updated 2 years ago
- CLI tool to annotate genes with KOfam☆87Updated 2 years ago
- A curated list of phage related software and computational resources for phage scientists, bioinformaticians and enthusiasts.☆49Updated 3 years ago
- A listing of software, tools and databases useful for virome analysis☆58Updated last week
- Bin Chicken - recovery of low abundance and taxonomically targeted metagenome assembled genomes (MAGs) through strategic coassembly☆68Updated 3 weeks ago
- PATO is a R package designed to analyze pangenomes (set of genomes) intra or inter species.☆62Updated 2 years ago