Alternatives and similar repositories for mettannotator:

Users that are interested in mettannotator are comparing it to the libraries listed below

• Kalan-Lab / zol
  zol (& fai): large-scale targeted detection and evolutionary investigation of gene clusters (i.e. BGCs, phages, etc.)
  ☆59Updated this week
• cultivarium / MicrobeMod
  A toolkit for exploring prokaryotic methylation and base modifications in nanopore sequencing
  ☆47Updated 3 months ago
• SWittouck / SCARAP
  A toolkit for prokaryotic comparative genomics
  ☆48Updated 3 months ago
• endixk / ezaai
  EzAAI - High Throughput Prokaryotic AAI Calculator
  ☆40Updated 6 months ago
• gbouras13 / plassembler
  Program to quickly and accurately assemble plasmids in hybrid and long-only sequenced bacterial isolates
  ☆62Updated 3 months ago
• raw-lab / MetaCerberus
  Python code for versatile Functional Ontology Assignments for Metagenomes searching via Hidden Markov Model (HMM) with environmental focu…
  ☆57Updated 2 weeks ago
• nvelden / geneviewer
  An R package designed for drawing gene arrow maps
  ☆76Updated last week
• irycisBioinfo / PATO
  PATO is a R package designed to analyze pangenomes (set of genomes) intra or inter species.
  ☆58Updated last year
• moshi4 / ANIclustermap
  A tool for drawing ANI clustermap between all-vs-all microbial genomes
  ☆78Updated this week
• happykhan / BRIG
  BRIG is a cross-platform (Windows/Mac/Unix) application that can display circular comparisons between a large number of genomes, with a f…
  ☆34Updated 6 years ago
• weisberglab / beav
  BEAV: Bacterial Element Annotation reVamped
  ☆64Updated 6 months ago
• BigDataBiology / argNorm
  ARG normalization by mapping to the ARO ontology.
  ☆51Updated 2 weeks ago
• bhattlab / lathe
  A tool for generating bacterial genomes from metagenomes with nanopore long read sequencing
  ☆70Updated 3 years ago
• ziyewang / COMEBin
  ☆52Updated last year
• moshi4 / COGclassifier
  A tool for classifying prokaryote protein sequences into COG(Cluster of Orthologous Genes) functional category
  ☆64Updated this week
• shenwei356 / gtdb-taxdump
  GTDB taxonomy taxdump files with trackable TaxIds
  ☆53Updated last week
• microbial-pangenomes-lab / microGWAS
  Bacterial GWAS analysis
  ☆40Updated 2 weeks ago
• voorloopnul / awesome-phages
  A curated list of phage related software and computational resources for phage scientists, bioinformaticians and enthusiasts.
  ☆48Updated 2 years ago
• Gibbons-Lab / isb_course_2023
  Materials and presentation for the 2023 ISB Microbiome course.
  ☆24Updated 7 months ago
• Kalan-Lab / lsaBGC
  lsaBGC - Lineage Specific Analysis of Biosynthetic Gene Clusters
  ☆37Updated 2 weeks ago
• zreitz / multismash
  A workflow and scripts for large-scale antiSMASH analyses
  ☆39Updated last month
• XiaofangJ / PhaseFinder
  A pipeline to computationally identify invertible DNA regions and quantify their orientations.
  ☆29Updated last year
• adlape95 / Assembly-methods-nanopore
  Assembly methods for nanopore-based metagenomic sequencing: a comparative study
  ☆18Updated 4 years ago
• deprekate / PHANOTATE
  PHANOTATE: a gene caller for phages.
  ☆74Updated 5 months ago
• bacpop / ggCaller
  Bifrost graph gene caller.
  ☆93Updated 7 months ago
• arumugamlab / msamtools
  Metagenomics-related extended functionalities to samtools
  ☆21Updated last year
• BackofenLab / CRISPRidentify
  ☆29Updated 4 months ago
• EBI-Metagenomics / EukCC
  Tool to estimate genome quality of microbial eukaryotes
  ☆37Updated 3 months ago
• Serka-M / mmlong2
  Bioinformatics pipeline for recovery and analysis of metagenome-assembled genomes
  ☆46Updated last month
• nselem / corason
  Bioinformatic Tools for study Evolution of metabolic diversity
  ☆33Updated last year