quadram-institute-bioscience / dadaist2Links
Dadaist2 π¨ Highway to R
β13Updated 9 months ago
Alternatives and similar repositories for dadaist2
Users that are interested in dadaist2 are comparing it to the libraries listed below
Sorting:
- MiCoP is a method for high-accuracy profiling of viral and fungal metagenomic communities.β15Updated 3 years ago
- Strain-level abundances estimation in metagenomic samples using variation graphsβ24Updated 2 years ago
- GRIMER performs analysis of microbiome studies and generates a portable and interactive dashboard integrating annotation, taxonomy and meβ¦β24Updated 2 years ago
- Core ELEment Bias Removal In Metagenome Binned ORthologs: A pipeline to make pangenomes from MAGsβ25Updated last year
- MetaSNV, a metagenomic SNV calling pipeline.β20Updated 3 years ago
- ccfind - circular complete genome finder with clues of terminal redundancyβ16Updated 5 years ago
- Metagenomic Intra-Species Diversity Analysis (MIDAS)β40Updated last year
- β‘οΈπ§¬ FastMLST: A multi-core tool for multilocus sequence typing of draft genome assembliesβ27Updated last month
- Phylogeny Enhanded Prediction of PAN-genomeβ43Updated 5 years ago
- A functional profiler for metagenomes using FracMinHashβ20Updated 5 months ago
- MAG Circularization Methodβ32Updated last month
- scripts for microbiome analysisβ11Updated last year
- MAGScoT - a MAG scoring and refinement toolβ41Updated last year
- β28Updated last week
- pipeline for read mapping, snp calling and annotation for bacterial genomesβ13Updated last year
- SynTracker is a pipeline, designated to determine the biological relatedness of conspecific strains (microbial strains of the same specieβ¦β38Updated 3 months ago
- Download assembly files from NCBIβ13Updated 2 years ago
- Meteor is a plateform for quantitative metagenomics profiling of complex ecosystems. Meteor relies on genes catalogue to perform species-β¦β32Updated last week
- BinaRena: Interactive Visualization and Binning of Metagenomic Contigsβ33Updated last year
- Protologgger is a tool for the description of novel taxa by providing taxonomic, functional and ecological insightsβ15Updated last month
- Bacterial GWAS analysisβ46Updated 2 months ago
- From genomes to phenotypes: Traitar3, the microbial trait analyzer (for Python3)β21Updated last year
- Remove contaminated contigs from genomes using k-mers and taxonomies.β59Updated 2 years ago
- Rapid and simple taxonomic profiling of genome and metagenome contigsβ29Updated 2 years ago
- a pipeline for reconciliation of phylogenetic histories within a bacterial pangenomeβ50Updated 3 years ago
- Strain Resolution ON Graphsβ49Updated 2 years ago
- MAGinator - Accurate SNV calling and profiling of MAGsβ24Updated 7 months ago
- β22Updated 2 years ago
- Calculate assocations between genes and traitsβ29Updated 9 months ago
- RCandy: an R package for visualising homologous recombination events in bacterial genomesβ25Updated 3 years ago