ukaraoz / microtraitLinks
☆43Updated last year
Alternatives and similar repositories for microtrait
Users that are interested in microtrait are comparing it to the libraries listed below
Sorting:
- This is a comprehensive database for fast and accurately analyzing the phosphorus cycling genes.☆31Updated 3 years ago
- Growth Rate Index (GRiD) measures bacterial growth rate from reference genomes (including draft quality genomes) and metagenomic bins at …☆31Updated 5 years ago
- CroCoDeEL is a tool that detects cross-sample contamination in shotgun metagenomic data☆24Updated 4 months ago
- ☆48Updated last week
- ☆60Updated this week
- ☆54Updated 5 months ago
- MetaCompare☆19Updated last year
- MuDoGeR makes the recovery of genomes from prokaryotes, viruses, and eukaryotes from metagenomes easy.☆88Updated last year
- Improvement of metagenome-assembled genomes☆54Updated 5 years ago
- An R package for removing contamination from metabarcoding (e.g., microbiome) datasets post-sequencing☆20Updated 2 years ago
- Tool to estimate genome quality of microbial eukaryotes☆38Updated 4 months ago
- ☆26Updated 2 years ago
- BEAV: Bacterial Element Annotation reVamped☆72Updated 3 months ago
- Linking MAGs with 16S rRNA marker genes☆27Updated 10 months ago
- zol (& fai): large-scale targeted detection and evolutionary investigation of gene clusters (i.e. BGCs, phages, etc.)☆70Updated 2 weeks ago
- MicrobeCensus estimates the average genome size of microbial communities from metagenomic data☆47Updated 5 years ago
- Bin Chicken - recovery of low abundance and taxonomically targeted metagenome assembled genomes (MAGs) through strategic coassembly☆63Updated last week
- ☆14Updated last year
- A machine learning-based tool for predicting metabolic modules in incomplete bacterial genomes.☆22Updated 4 months ago
- A metatranscriptomic pipeline optimized for the study of microeukaryotes.☆17Updated last year
- ☆14Updated 2 years ago
- ☆33Updated 2 years ago
- A pipeline for the macro- and micro-diversity analyses and visualization of metagenomic-derived populations☆43Updated 2 years ago
- AMR++ is a bioinformatic pipeline meant to aid in the analysis of raw sequencing reads to characterize the profile of antimicrobial resis…☆45Updated last week
- ☆28Updated this week
- Gene Absence Presence Identification tool.☆27Updated 8 months ago
- This is a collection of scripts for analyzing mixed 16S/18S amplicon sequences using tools such as qiime2, DADA2, deblur, and bbtools☆36Updated 3 months ago
- Metagenomics-related extended functionalities to samtools☆22Updated 2 years ago
- ☆50Updated this week
- dada2 formatted nifH database☆13Updated last year