Functional code templates for the Star Protocols paper describing consolidated WES variant calling with 3 callers
☆10Oct 18, 2024Updated last year
Alternatives and similar repositories for star_protocols_wes3x
Users that are interested in star_protocols_wes3x are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Analysis of snRNA-seq2 data coming from 3 months old mouse liver, dissecting the influence ploidy has on gene expression.☆14Dec 6, 2021Updated 4 years ago
- ☆18Feb 18, 2021Updated 5 years ago
- An R package with toolkits for tong's friends☆11Mar 18, 2025Updated last year
- Cool Bioinformatics Scripts☆12May 21, 2024Updated last year
- Copy Number Methods for Detection and Genome Wide Association Tests☆22Nov 4, 2024Updated last year
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Bacterial typing pipeline for clinical NGS data. Written in NextFlow, Python & Bash.☆13Updated this week
- Basics of the OSCA book☆14Sep 29, 2025Updated 5 months ago
- ☆20Jun 12, 2023Updated 2 years ago
- Prioritizing Copy Number Variants (CNV) using Phenotype and Gene Functional Similarity☆17Mar 10, 2022Updated 4 years ago
- do some exercise☆14Dec 2, 2025Updated 3 months ago
- A robust and accurate cell type classifier for single cell RNA-seq data☆17Mar 15, 2023Updated 3 years ago
- Tumour Heterogeneity and Intercellular Networks of Nasopharyngeal Carcinoma at Single Cell Resolution☆13Mar 1, 2023Updated 3 years ago
- Collection of notes and scripts related to NGS☆14Feb 18, 2026Updated last month
- ☆49Feb 14, 2024Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- Every Gene Ever Annotated in published GWAS☆51Nov 28, 2022Updated 3 years ago
- Cross-protein transfer learning for variant effect prediction☆20Sep 13, 2023Updated 2 years ago
- Beyondcell is a computational methodology for identifying tumour cell subpopulations with distinct drug responses in single-cell RNA-seq …☆58Sep 17, 2024Updated last year
- ☆18May 12, 2023Updated 2 years ago
- The R package scCODE, a platform for data-specific DE gene detection for scRNA-seq data☆14Nov 9, 2023Updated 2 years ago
- BSMN common data processing pipeline☆11Jun 6, 2025Updated 9 months ago
- A single-cell RNAseq differential expression analysis approach in case-control study☆10Mar 6, 2022Updated 4 years ago
- This is a pipeline for variant annotation in the diagnosis of rare genetic disorders. It relies on open source data and has instructions …☆18Mar 20, 2023Updated 3 years ago
- A Pipeline to Process RNAseq Data☆15Jun 15, 2022Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- Quality control steps for GWAS☆26Aug 11, 2023Updated 2 years ago
- A Comprehensive Rare Disease Diagnostic Dataset with nearly 50,000 patients covering more than 4000 diseases☆36Mar 13, 2026Updated last week
- GOAT: efficient and robust identification of gene set enrichment☆14Jan 24, 2026Updated 2 months ago
- SOAP-HLA is a flow of sequencing data analysis pipeline to type all of the HLA genes in IMGT/HLA database using capture sequenced data or…☆10Jun 3, 2020Updated 5 years ago
- A method which leverages scRNA-seq data to achieve two goals: (1) to infer the cell types in which the disease-associated genes manifest …☆26Sep 20, 2022Updated 3 years ago
- Signaling Pathway Visualizer☆10Jun 22, 2019Updated 6 years ago
- ☆11Mar 23, 2022Updated 4 years ago
- Locate transgenic insertion sites☆11Mar 14, 2023Updated 3 years ago
- Analysis pipeline for CUT&TAG data☆23Sep 2, 2020Updated 5 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Drug Response Estimation from single-cell Expression Profiles☆12Jan 5, 2024Updated 2 years ago
- Detection of allele-specific subclonal copy number alterations from single-cell transcriptomic data.☆38Jan 22, 2026Updated 2 months ago
- NGS DNA best practice pipeline for Illumina sequencing - alignment, variant calling, annotation and QC☆18Aug 22, 2025Updated 7 months ago
- As part of the COVID-19 Host Genetics Global initative, this repo serves to corroborate sample scripts for sequencing QC.☆12Jul 30, 2020Updated 5 years ago
- Repository of common bioinformatics scripts☆39Sep 21, 2021Updated 4 years ago
- Toy files and training material to introduce Linux to molecular biologists☆22Jul 21, 2023Updated 2 years ago
- Repository for RecallME-v.0.1 a variant calling pipelines benchmarker and optimizer☆13Dec 18, 2023Updated 2 years ago