celiamtnez / snRNA-seq2_youngLinks
Analysis of snRNA-seq2 data coming from 3 months old mouse liver, dissecting the influence ploidy has on gene expression.
☆13Updated 3 years ago
Alternatives and similar repositories for snRNA-seq2_young
Users that are interested in snRNA-seq2_young are comparing it to the libraries listed below
Sorting:
- ☆12Updated 4 years ago
- Analyzing chromatin accessibility data in R☆18Updated 2 years ago
- ☆17Updated last year
- Matrix factorization model for interpreting single cell gene expression in biologically heterogeneous data☆22Updated last year
- This is the repository which contains the code that was used to generate the results and figures of the “Single-cell RNA-sequencing revea…☆11Updated last year
- Gene Set + S2G strategy annotations analyzed for disease architecture☆55Updated 2 years ago
- Analytical tools and pipelines for bulk and single cell epigenomic and human genetic data☆27Updated 4 years ago
- Code to reproduce analyses in Nasser, Bergman, Fulco, Guckelberger, Doughty et al Nature 2021☆15Updated 4 years ago
- Analysis pipelines for QTL discovery and GWAS signals interpretation☆12Updated last year
- Publication Page for the Noack et al. 2021 Nature Neuroscience paper☆10Updated 3 years ago
- A sandbox for benchmarking detection of out-of-reference cells in single-cell genomics data☆13Updated 11 months ago
- ☆25Updated 3 years ago
- Testing a neutral evolution model on cancer sequencing data☆10Updated 4 years ago
- bioinformatics R test code☆14Updated last month
- This repository contains code for the evaluation of epithelial-to-mesenchymal transition states in cancer.☆13Updated 2 years ago
- Gene Expression Decomposition and Integration☆19Updated 8 months ago
- single cell and bulk RNASeq analysis scripts☆12Updated 3 years ago
- Reproducibility code for the manuscript: 'Inferring and perturbing cell fate regulomes in human cerebral organoids☆29Updated 2 years ago
- scripts for the integrating ATAC-seq, RNA-seq and CHi-C paper☆25Updated 2 years ago
- ☆12Updated 6 years ago
- ☆17Updated 2 years ago
- A method which leverages scRNA-seq data to achieve two goals: (1) to infer the cell types in which the disease-associated genes manifest …☆26Updated 3 years ago
- In this study, we perform systematic comparative analysis of seven widely-used SNV-calling methods, including SAMtools, the GATK Best Pra…☆16Updated 6 years ago
- ☆20Updated 3 months ago
- ☆20Updated 2 years ago
- Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles☆33Updated 6 months ago
- ☆16Updated 2 years ago
- ☆10Updated 5 months ago
- Difference in Intercellular Communication from scRNA-seq data☆22Updated last week
- A record of the analysis pipelines used to create the HTAPP data☆33Updated 6 months ago