Alternatives and similar repositories for PrimerDesign:

Users that are interested in PrimerDesign are comparing it to the libraries listed below

• shahcompbio / wgs
  Whole genome workflows
  ☆12Updated 3 months ago
• amf71 / ECLIPSE
  ☆11Updated last year
• smlmbrt / SimilarityRegression
  Predicting TF sequence-specificity similarity with weighted alignments
  ☆13Updated 5 years ago
• cyang235 / smooth-seq
  A pipeline for Smooth-seq data analysis.
  ☆10Updated 3 years ago
• smithlabcode / abismal
  Abismal is a mapper of FASTQ bisulfite-converted short reads (between 50 and 1000 bases) to a FASTA reference genome.
  ☆17Updated last week
• daewoooo / StrandPhaseR
  R Package for phasing of single cell Strand-seq data
  ☆10Updated last month
• oicr-gsi / sequenza
  Workflow for Sequenza, cellularity and ploidy
  ☆19Updated 8 months ago
• Gregor-Mendel-Institute / bookend
  End-guided RNA assembler
  ☆15Updated 3 months ago
• comprna / ORQAS
  ORF Quantification pipeline for Alternative Splicing
  ☆16Updated 3 years ago
• MarioniLab / sarlacc
  The R package "sarlacc" contains a pipeline to analyse nanopore sequencing data. It trims adapter sequences, retrieves optional UMI's, cl…
  ☆13Updated 6 years ago
• mdozmorov / RNA-seq
  RNA-seq analysis scripts
  ☆15Updated 2 years ago
• ajank / balancer-paper
  Computational analyses of WGS, mate-pair, RNA-seq, Hi-C and Capture-C data from highly rearranged balancer chromosomes in Drosophila mela…
  ☆10Updated 5 years ago
• Xinglab / lr2rmats
  Long read to rMATS
  ☆31Updated last year
• flemingtonlab / SpliceTools
  ☆18Updated 7 months ago
• khuranalab / CompositeDriver
  Combined mutation recurrence and functional impact to identify coding and non-coding cancer drivers
  ☆15Updated 6 years ago
• aakechin / cutPrimers
  curPrimers is a tool for trimming primer sequences from amplicon based NGS reads
  ☆17Updated 5 years ago
• timplab / nanoNOMe
  nanoNOMe (Nucleosome Occupancy and Methylome nanopore sequencing) Analysis
  ☆18Updated 2 years ago
• zhongw2 / GeneTEFlow
  ☆23Updated 3 years ago
• a2iEditing / deNovo-Detect
  ☆11Updated 2 years ago
• dozmorovlab / HiCcompare
  Joint normalization of two Hi-C matrices, visualization and detection of differential chromatin interactions. See multiHiCcompare for the…
  ☆19Updated last year
• stjude / PrimerTK
  A toolkit to design standard primers, multiplexed primers, and primers around SV's
  ☆12Updated 2 years ago
• djhn75 / RNAEditor
  ☆15Updated 2 years ago
• parklab / SCAN2
  SCAN2 is a somatic SNV and indel genotyper for single cells amplified by Primary Template-Directed Amplification (PTA)
  ☆12Updated 7 months ago
• parklab / MSIprofiler
  Repo that aids in the detection of microsatellite instabilities (MSI) from sequencing data
  ☆20Updated 10 months ago
• bioinfo-biols / Code_for_circSC
  Analysis pipeline for our circSC manuscript
  ☆12Updated 2 years ago
• lcalviell / ORFquant
  An R package for Splice-aware quantification of translation using Ribo-seq data
  ☆18Updated last year
• Acribbs / TallyNN
  single-cell analysis workflows for double phosphoramidite barcode and UMI Correction (scCOLOR-seq)
  ☆13Updated last year
• nghiavtr / FuSeq_WES
  ☆11Updated last year
• zhongzhd / ont_m6a_detection
  ☆10Updated 6 months ago