HUPO-PSI / mzIdentML
Repository for mzIdentML and the corresponding examples
☆23Updated 4 months ago
Related projects ⓘ
Alternatives and complementary repositories for mzIdentML
- ☆31Updated last month
- HUPO-PSI mass spectrometry CV☆28Updated this week
- RawTools is an open-source and freely available package designed to perform scan data parsing and quantification, and quality control ana…☆64Updated last year
- An tandem mass spectrometry (MS/MS) sequence database search tool.☆45Updated this week
- mzTab Reporting MS-based Proteomics and Metabolomics Results☆39Updated 2 months ago
- ☆25Updated last year
- Instrument Application Programming Interface☆44Updated last month
- Fast and flexible semi-supervised learning for peptide detection in Python☆43Updated 2 months ago
- Fast and accurate label-free quantification for small and very large numbers of proteomes☆42Updated this week
- MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.☆38Updated this week
- An open-source Python package to unify raw MS data accession and storage.☆18Updated last month
- The triqler (TRansparent Identification-Quantification-linked Error Rates)'s source and example code☆21Updated 3 months ago
- Mass spectrometry data visualization☆36Updated 3 years ago
- The Proteomics sample metadata: Standard for experimental design annotation in proteomics datasets☆78Updated 3 weeks ago
- An R package to estimate relative protein abundances from ion quantification in DIA-MS-based proteomics☆22Updated 3 weeks ago
- ☆24Updated 2 weeks ago
- Ultra-fast label-free quantification algorithm for mass-spectrometry proteomics☆19Updated 3 weeks ago
- ☆13Updated 7 months ago
- Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Iso…☆34Updated 2 weeks ago
- A python package for fast post translational modification localization, powered by Cython.☆18Updated 10 months ago
- Top down / bottom up, MS/MS analysis tool for DDA and DIA mass spectrometry data☆29Updated 2 years ago
- A library for deisotoping and charge state deconvolution of complex mass spectra☆33Updated 2 months ago
- ProteoBench is an open and collaborative platform for community-curated benchmarks for proteomics data analysis pipelines. Our goal is to…☆35Updated this week
- Rescoring and spectral library generation pipeline for proteomics.☆33Updated this week
- MS/MS prediction for peptides☆22Updated 3 years ago
- pathway and network analysis for metabolomics☆38Updated 5 months ago
- Workflow for LC-MS feature analysis and spatial mapping☆19Updated 6 years ago
- Open-source C++ and Python module for opening binary timsTOF data files.☆44Updated 3 weeks ago
- An open-source Python package for dia-PASEF methods with Automated Isolation Design (py_diAID) from the Mann Labs at the Max Planck Inst…☆18Updated 2 months ago
- ☆17Updated 3 years ago