Repository for mzIdentML and the corresponding examples
☆27May 6, 2026Updated 3 weeks ago
Alternatives and similar repositories for mzIdentML
Users that are interested in mzIdentML are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Reporting and exchange format for mass spectrometry quality control data☆33May 8, 2026Updated 2 weeks ago
- PSI-MOD ontology for modified and unmodified amino acid residues☆16Apr 22, 2026Updated last month
- Lorikeet is a JQuery plugin to view MS/MS spectra annotated with fragment ions.☆18Sep 7, 2023Updated 2 years ago
- Repository for mzML and the corresponding examples☆37Apr 5, 2024Updated 2 years ago
- A tool integrates channel abundances from multiple TMT samples and exports a general report for downstream analysis.☆14Apr 21, 2026Updated last month
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- PIA - Protein Inference Algorithms☆25Apr 14, 2026Updated last month
- mzSpecLib: A standard format to exchange/distribute spectral libraries☆32Mar 27, 2026Updated last month
- HUPO-PSI mass spectrometry CV☆41Apr 24, 2026Updated last month
- MSBooster allows users to add deep learning-based features to .pin files before Percolator PSM rescoring☆21May 17, 2026Updated last week
- Open-source java library to handle different file format standards for proteomics. Specially ms-data-core-api is good for MetaData repres…☆12Oct 23, 2019Updated 6 years ago
- mzTab Reporting MS-based Proteomics and Metabolomics Results☆46Apr 1, 2025Updated last year
- Implementation of UniSpec, a deep learning model for predicting full fragment ion peptide spectra.☆12Feb 11, 2025Updated last year
- A modest Feature Finder (moFF) to extract MS1 intensities from Thermo raw file☆33Apr 19, 2021Updated 5 years ago
- Risa allows to access metadata/data in ISA-tab format and builds Bioconductor data structures. Apart from parsing ISA-tab files, the pack…☆20Oct 17, 2018Updated 7 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Thermo MSFileReader Python bindings☆70May 4, 2021Updated 5 years ago
- ☆13Mar 19, 2024Updated 2 years ago
- Library for mass spectrometry projects☆27Updated this week
- RawTools is an open-source and freely available package designed to perform scan data parsing and quantification, and quality control ana…☆71Jan 6, 2026Updated 4 months ago
- A modular JavaScript viewer for mass spectrometry data☆12May 20, 2022Updated 4 years ago
- Computational analysis for mass spectrometry-based proteomics data☆11Apr 25, 2016Updated 10 years ago
- Implementations of compression schemes for numeric data from mass spectrometers.☆13Mar 3, 2021Updated 5 years ago
- Python tools for proteogenomics analysis toolkit☆15May 18, 2026Updated last week
- AutoRT: Peptide retention time prediction using deep learning☆30Jul 31, 2024Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Proteogenomics database-generation tool for protein haplotypes and variants☆11Jun 19, 2025Updated 11 months ago
- Top down / bottom up, MS/MS analysis tool for DDA and DIA mass spectrometry data☆31Oct 5, 2022Updated 3 years ago
- Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python☆31May 13, 2026Updated 2 weeks ago
- The web server application and directly connected components for a MassBank web server☆19Dec 19, 2025Updated 5 months ago
- C# Mass Spectrometry Library☆40Jun 14, 2022Updated 3 years ago
- ☆38May 20, 2026Updated last week
- Proteomics search software with integrated calibration, PTM discovery, bottom-up, top-down and LFQ capabilities☆110May 19, 2026Updated last week
- MSDK source code repository☆40Sep 22, 2022Updated 3 years ago
- Ultra-fast label-free quantification algorithm for mass-spectrometry proteomics☆24Apr 8, 2026Updated last month
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Democratizing ML in proteomics☆53May 6, 2026Updated 3 weeks ago
- Paper collection about de novo peptide Sequening☆23Feb 5, 2025Updated last year
- SUmmarizing Multiple Enrichment analysis Results☆10Nov 14, 2024Updated last year
- Metabolomics Tools for Galaxy☆21Nov 22, 2016Updated 9 years ago
- a deep learning-based retention time alignment tool for large cohort LC-MS data analysis☆15Dec 6, 2023Updated 2 years ago
- ☆16Jul 20, 2022Updated 3 years ago
- An R package to estimate relative protein abundances from ion quantification in DIA-MS-based proteomics☆33Mar 21, 2026Updated 2 months ago