Nesvilab / MSBooster
MSBooster allows users to add deep learning-based features to .pin files before Percolator PSM rescoring
☆16Updated last month
Related projects ⓘ
Alternatives and complementary repositories for MSBooster
- MS/MS prediction for peptides☆22Updated 3 years ago
- Python package for investigating the structural context of PTMs☆27Updated 10 months ago
- An open-source Python package to unify raw MS data accession and storage.☆18Updated 2 months ago
- A global network optimization approach for untargeted LC-MS metabolomics data annotation and metabolite discovery☆44Updated last year
- Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Iso…☆34Updated last week
- ☆54Updated 6 months ago
- TimsR: Easy access to timsTOF Pro data from R.☆9Updated 3 years ago
- Fast and flexible semi-supervised learning for peptide detection in Python☆43Updated 2 months ago
- ☆10Updated 2 years ago
- An tandem mass spectrometry (MS/MS) sequence database search tool.☆45Updated last week
- MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.☆38Updated this week
- Chemical Similarity Enrichment analysis of metabolomics datasets☆27Updated 4 months ago
- MSLibrarian is an R-package to optimize predicted spectral libraries for DIA proteomics☆14Updated 2 years ago
- Knowledge-guided multilayer network approach is executed in MetDNA2☆13Updated 2 years ago
- MassDash: A web-based dashboard for streamlined DIA-MS visualization, analysis, prototyping, and optimization☆19Updated last week
- A Python interface to proteomics data repositories☆30Updated 6 months ago
- The state of the art Deep CNN neural network for de novo sequencing of tandem mass spectra☆32Updated 3 weeks ago
- Infrastructure of AlphaX ecosystem☆31Updated this week
- Democratizing ML in proteomics☆28Updated last week
- MaxQuant with snakemake and singularity workflow for open and scalable mass spectrometry data analysis on Linux computing clusters☆26Updated 6 years ago
- EasyPQP: Simple library generation for OpenSWATH☆10Updated last month
- ☆32Updated last month
- Fast and accurate label-free quantification for small and very large numbers of proteomes☆42Updated 2 weeks ago
- R package for optimized LC-MS spectra processing☆22Updated last week
- The triqler (TRansparent Identification-Quantification-linked Error Rates)'s source and example code☆21Updated 4 months ago
- ☆24Updated last year
- A label free quantification tool.☆16Updated 5 months ago
- GLEAMS is a Learned Embedding for Annotating Mass Spectra.☆22Updated last year
- An R package to estimate relative protein abundances from ion quantification in DIA-MS-based proteomics☆22Updated last month
- Python framework for Deep Learning in Proteomics☆23Updated 3 weeks ago