Nesvilab / MSBoosterLinks
MSBooster allows users to add deep learning-based features to .pin files before Percolator PSM rescoring
☆19Updated this week
Alternatives and similar repositories for MSBooster
Users that are interested in MSBooster are comparing it to the libraries listed below
Sorting:
- MS/MS prediction for peptides☆24Updated 4 years ago
- EasyPQP: Simple library generation for OpenSWATH☆11Updated this week
- A label free quantification tool.☆17Updated last month
- Transformer deep learning model for de novo sequencing of data-independent acquisition mass spectrometry data☆22Updated 5 months ago
- GLEAMS is a Learned Embedding for Annotating Mass Spectra.☆26Updated last year
- A global network optimization approach for untargeted LC-MS metabolomics data annotation and metabolite discovery☆47Updated last year
- Fast and flexible semi-supervised learning for peptide detection in Python☆47Updated 5 months ago
- ☆33Updated 2 weeks ago
- Python client for PRIDE Archive Rest API.☆24Updated 3 months ago
- MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.☆44Updated 4 months ago
- Differential Expression Analysis tool box R lang package for omics data☆45Updated last month
- ☆62Updated last year
- The state of the art Deep CNN neural network for de novo sequencing of tandem mass spectra☆39Updated 9 months ago
- R package for optimized LC-MS spectra processing☆25Updated last week
- pathway and network analysis for metabolomics☆42Updated last year
- MetNormalizer is used to normalize large scale metabolomics data.☆22Updated 4 years ago
- TimsR: Easy access to timsTOF Pro data from R.☆11Updated 4 years ago
- An R package to estimate relative protein abundances from ion quantification in DIA-MS-based proteomics☆31Updated 5 months ago
- ☆24Updated 2 years ago
- Pre-processing of mass spectrometry-based metabolomics data with quantification and identification based on MS1 and MS2 data.☆24Updated 2 months ago
- Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Iso…☆52Updated last week
- R package for functionally scoring phosphorylation sites☆22Updated 5 years ago
- ☆11Updated 3 years ago
- MS-GF+ (aka MSGF+ or MSGFPlus) performs peptide identification by scoring MS/MS spectra against peptides derived from a protein sequence …☆79Updated last year
- A Python interface to proteomics data repositories☆34Updated last month
- Pipeline for de novo peptide sequencing (Novor, DeepNovo, SMSNet, PointNovo, Casanovo) and assembly with ALPS.☆41Updated last year
- Python package for investigating the structural context of PTMs☆28Updated 7 months ago
- MaxQuant with snakemake and singularity workflow for open and scalable mass spectrometry data analysis on Linux computing clusters☆27Updated 7 years ago
- Spectral library searching using approximate nearest neighbor techniques.☆43Updated 3 months ago
- Data Processing Kitchen Sink for proteomics data☆11Updated 3 months ago