bgruening / coding_for_big_data
X things you should take into consideration if you code for big data analysis
☆23Updated 6 years ago
Alternatives and similar repositories for coding_for_big_data:
Users that are interested in coding_for_big_data are comparing it to the libraries listed below
- cache packages permanently☆13Updated 8 months ago
- Awesome resources related to Galaxy project☆11Updated 3 months ago
- Simple tool to verticalize text delimited files.☆36Updated 10 months ago
- ☆13Updated 7 years ago
- Docker images of bioinformatics software☆21Updated 7 years ago
- Homebrew formulae for bioinformatics software only available for Linux☆27Updated 5 years ago
- Nextflow workshop 2018 -- Training pages -> https://nextflow-io.github.io/nf-hack18/☆18Updated 5 years ago
- Request for comments on interchangeable bioinformatics containers☆40Updated 5 years ago
- Galaxy tools and workflows developed at the Earlham Institute☆14Updated last week
- An easy-to-use way for running Galaxy workflows.☆20Updated 5 years ago
- Precursor to SnakeChunks, see https://github.com/SnakeChunks/SnakeChunks. This project has moved and will no longer be edited here.☆11Updated 7 years ago
- Import and run CWL workflows on DNAnexus (alpha)☆13Updated 6 years ago
- ☆14Updated 6 years ago
- Import a CWL workflow specification to Nextflow script (experimental)☆27Updated 6 years ago
- Flexible omics pipeline☆18Updated 7 months ago
- Automatic Packaging and Distribution of Bioinformatics Pipelines☆26Updated 7 years ago
- GitHub Action to launch a workflow using Nextflow Tower.☆12Updated last year
- What's The Function of these genes?☆22Updated 7 years ago
- programs and scripts, mainly python, for analyses related to nucleic or protein sequences☆24Updated last week
- Library of snakemake rules.☆12Updated 6 years ago
- Malleable All-seeing Journal Of Research Artifacts☆36Updated last year
- The snakemake interface, currently works like a notebook (under development)☆18Updated 3 years ago
- The command-line interface to GGD☆42Updated 2 years ago
- Luslab nextflow modules☆14Updated 3 years ago
- reference free variant assembly☆33Updated last year
- List of tools included in https://usegalaxy.eu☆26Updated this week
- Tool to upload SARS-CoV-2 sequences to BH20 Arvados instance and orchestrate analysis☆13Updated 2 years ago
- Reads the output from CLI help commands, and generates machine readable schemas (CWL etc)☆14Updated 4 years ago
- Classify sequencing reads using MinHash.☆48Updated 4 years ago
- An integrated high performance bioinformatics toolkit☆23Updated 5 years ago