haotian-zhuang / findPCLinks
Automatic selection of number of principal components
☆17Updated 3 years ago
Alternatives and similar repositories for findPC
Users that are interested in findPC are comparing it to the libraries listed below
Sorting:
- Code and results from TotalSeqC antibody titration and pipeline benchmarking for CITE-seq experiments☆10Updated 4 years ago
- Gene-level general linear mixed model☆23Updated 2 months ago
- An R package for visualising cell-cell interactions☆44Updated last year
- cEll tyPe enrIChment☆16Updated 3 years ago
- Efficiently compute robust markers across single-cell datasets☆11Updated 4 years ago
- Flexible, probablistic metrics for quality control of scRNA-seq data☆21Updated 2 years ago
- R package for distinguishing cells from background barcodes in droplet-based single-cell RNA-seq data☆11Updated 2 years ago
- Human brain, >200,000 nuclei☆24Updated 4 years ago
- Trans-association between HLA and TCR-CDR3☆19Updated 2 years ago
- BioCarta pathway images☆11Updated 2 years ago
- An R package for multi-dimensional pathway enrichment analysis☆16Updated 8 months ago
- ☆14Updated 6 years ago
- Perform differential expression analysis on cohort-scale single cell datasets using linear mixed models☆20Updated 2 months ago
- NOTE: This package has been renamed to sparrow and will be submitted to Bioconductor 3.14. Please use that package instead. This is kept …☆21Updated 5 years ago
- R package for benchmarking single cell analysis methods☆32Updated 2 years ago
- ☆11Updated 2 years ago
- ☆25Updated 6 months ago
- Wrapper and helper functions to use bulk RNA-seq differential expression methods with single-cell data☆21Updated last year
- Collection of analysis methods for small count data generated by rafalab members (the methods, not the data).☆21Updated last year
- CellAnn☆12Updated 2 years ago
- This R package for performing module repertoire analyses and generating fingerprint representations☆16Updated 4 years ago
- Convert your single-cell/spatial analyses to parallel HPC/cloud workflows just using pipes in R☆15Updated last year
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Updated 4 years ago
- ☆16Updated 3 years ago
- Testing a neutral evolution model on cancer sequencing data☆10Updated 4 years ago
- R vignettes for processing BUS format single-cell RNA-seq files☆21Updated 5 years ago
- Variance stabilizing transformation for Gamma Poisson distributed data☆22Updated 2 years ago
- ☆16Updated 3 years ago
- Calculation of distance metrics for matrices☆26Updated 6 years ago
- DiffNetFDR☆10Updated 7 years ago