MonashBioinformaticsPlatform / LFQ-Analyst
The repo for LFQ-Analyst
☆28Updated 3 months ago
Related projects ⓘ
Alternatives and complementary repositories for LFQ-Analyst
- R package - MSstats☆74Updated this week
- R package for analysing proteomics data☆48Updated last year
- Differential Expression Analysis tool box R lang package for omics data☆40Updated 3 weeks ago
- Tools for normalization, evaluation of outliers, technical biases and batch effects and differential expression analysis.☆19Updated last month
- A tool for large scale omics datasets evaluation☆24Updated last year
- tidymass☆53Updated 10 months ago
- Methods for label-free mass spectrometry proteomics☆14Updated 11 months ago
- DEqMS is a tool for quantitative proteomic analysis☆22Updated 4 years ago
- MS-DAP: downstream analysis pipeline for quantitative proteomics☆31Updated last month
- Using R and Bioconductor packages for the analysis and comprehension of proteomics data.☆88Updated last year
- amica: an interactive and user-friendly web-based platform for the analysis of proteomics data☆23Updated last year
- A Quality Control (QC) pipeline for Proteomics (PTX) results generated by MaxQuant☆42Updated 8 months ago
- Protein Differential Abundance for Label-Free Mass Spectrometry https://const-ae.github.io/proDA/☆18Updated last year
- An S3 data object and framework for common quantitative proteomic analyses☆34Updated last month
- Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Iso…☆31Updated 6 months ago
- Proteomics Toolset for Integrative Data Analysis☆22Updated last year
- Quantitative features for mass spectrometry data☆25Updated last month
- R-based package for detecting differentially abundant proteins in shotgun mass spectrometry-based proteomic experiments with tandem mass …☆26Updated last week
- NAguideR: performing and prioritizing missing value imputations for consistent bottom-up proteomic analyses☆43Updated 3 years ago
- Workshop illustrating mass spectrometry data analysis in R and use of the updated xcms functionality for the preprocessing of LC-MS data.☆26Updated last year
- metaX: a flexible and comprehensive software for processing omics data.☆23Updated last year
- Repository for the Broad Institute Proteogenomic Data Analysis Center (PGDAC) established by the NIH Clinical Proteomics Tumor Analysis C…☆33Updated 2 weeks ago
- Imputation of missing values of a matrix or data.frame using iterative prediction model☆31Updated last month
- StatsPro : systematic integration and evaluation of statistical approaches for detecting differential expression in label-free quantitat…☆12Updated 2 years ago
- Examples of TMT data analyses using R. Links to notebooks and repositories. Also a few spectral counting analyses.☆21Updated 2 years ago
- Robust statistical inference for quantitative LC-MS proteomics☆33Updated last year
- DEP package☆27Updated 2 years ago
- LIMMA (an empirical Bayes method) pipeline for two group comparison in a proteomic experiment☆25Updated 11 months ago
- Report processing and protein quantification for MS-based proteomics☆36Updated last year
- R-Shiny GUI integrated with the MSstats package family☆13Updated this week