pereiramemo / AGS-and-ACN-toolsLinks
Fast and accurate Average Genome Size and 16S rRNA gene Average Copy Number computation in metagenomic data
☆14Updated 8 months ago
Alternatives and similar repositories for AGS-and-ACN-tools
Users that are interested in AGS-and-ACN-tools are comparing it to the libraries listed below
Sorting:
- Structural and functional annotation of eukaryotic metagenome-assembled genomes☆22Updated 2 years ago
- This is a comprehensive database for fast and accurately analyzing the phosphorus cycling genes.☆31Updated 3 years ago
- KEGG Module Evaluation Tool☆30Updated last year
- ☆26Updated 2 years ago
- A pipeline for the macro- and micro-diversity analyses and visualization of metagenomic-derived populations☆43Updated 2 years ago
- The Prokaryotic Genomics and Comparative Genomics Analysis Pipeline☆40Updated 2 years ago
- MAG Circularization Method☆33Updated 3 years ago
- Improvement of metagenome-assembled genomes☆54Updated 5 years ago
- A comprehensive bacterial core gene-set annotation pipeline based on Roary and pairwise ILPs☆30Updated 10 months ago
- ☆53Updated 2 months ago
- Pipeline for metagenome and metatranscriptome joint assembly☆21Updated 2 years ago
- ☆18Updated 3 years ago
- http://huttenhower.sph.harvard.edu/waafle☆20Updated 8 months ago
- Discover and annotate the virome☆49Updated this week
- Snakemake workflow to map and quantify microbial genomes in metagenomic reads☆13Updated last year
- Antibiotic resistance genes (ARGs) have accelerated microbial threats to human health during the last decade. Here we determined the risk…☆19Updated 3 years ago
- ☆13Updated 7 years ago
- Phylogeny Enhanded Prediction of PAN-genome☆42Updated 5 years ago
- Automatic eukaryotic taxonomic classification☆29Updated 3 months ago
- SCAPP is a plasmid assembly tool. This tool is described in our paper: https://microbiomejournal.biomedcentral.com/articles/10.1186/s4016…☆34Updated 2 years ago
- Downstream processing of VAMB binning for Viral Elucidation☆51Updated last year
- Prophage Activity Estimator☆26Updated last year
- EzAAI - High Throughput Prokaryotic AAI Calculator☆44Updated last month
- Extract metadata from biosamples in NCBI☆16Updated 4 years ago
- A machine learning-based tool for predicting metabolic modules in incomplete bacterial genomes.☆20Updated 2 weeks ago
- MAGScoT - a MAG scoring and refinement tool☆36Updated 10 months ago
- ☆17Updated 9 months ago
- ☆13Updated last year
- Taxonomic classification of viruses at Order and Family level☆20Updated 2 years ago
- Ley Lab MetaGenome Profiler DataBase generator☆50Updated 2 years ago