igbb-popescu-lab / NetSeekRLinks
A networks analysis pipeline for RNASeq time series data
☆14Updated 4 years ago
Alternatives and similar repositories for NetSeekR
Users that are interested in NetSeekR are comparing it to the libraries listed below
Sorting:
- A continually expanding collection of RNA-seq tools☆51Updated 11 months ago
- EasyFuse is a pipeline for accurate fusion gene detection from RNA-seq data.☆61Updated 9 months ago
- RNAseq pipeline based on snakemake☆26Updated 2 years ago
- Time-Course Multi-Omics data integration☆25Updated last year
- A list of alternative splicing analysis resources☆46Updated 5 months ago
- A pipeline to identify pathogenic microorganisms from scRNA-seq raw data.☆28Updated 2 years ago
- Benchmarking of aligners and variant callers for Whole Exome Sequencing data☆20Updated 6 years ago
- Workshop • Analysis of RNA-seq data☆36Updated last year
- Webpage of the "Introduction to RNA-Seq: From quality control to pathway analysis - streamed" SIB course.☆15Updated this week
- ☆27Updated 2 years ago
- A script to make downloading of SRA/GEO data easier☆31Updated last year
- Workflows for processing RNA data for germline short variant discovery with GATK v4 and related tools☆80Updated 4 years ago
- optimization of ribosome P-site positioning in ribosome profiling data☆53Updated 6 months ago
- ☆39Updated 5 years ago
- ☆15Updated 3 years ago
- A method for circular DNA detection based on probabilistic mapping of ultrashort reads☆66Updated last year
- MeRIPseqPipe:An integrated analysis pipeline for MeRIP-seq data based on Nextflow.☆41Updated last year
- RNA editing quantification in deep transcriptome data☆15Updated 2 months ago
- rnasplice is a bioinformatics pipeline for RNA-seq alternative splicing analysis☆57Updated 3 months ago
- Integrative analysis pipeline for pooled CRISPR functional genetic screens☆30Updated last year
- From RNA-seq raw reads to enriched pathways by DEGs☆32Updated last year
- Identifying genome-wide translated open reading frames using ribosome profiling☆23Updated 2 years ago
- Assign gene names to regions in a BED file☆24Updated 2 years ago
- Tool for RNA-Seq analysis.☆39Updated 3 years ago
- A pipeline for identifying indel derived neoantigens using RNA-Seq data☆30Updated 3 years ago
- Full-length transcriptome splicing and mutation analysis☆84Updated last year
- ☆23Updated 4 years ago
- Pipeline for the identification of extrachromosomal circular DNA (ecDNA) from Circle-seq, WGS, and ATAC-seq data that were generated from…☆31Updated 3 months ago
- Locate transgenic insertion sites☆11Updated 2 years ago
- ☆50Updated 4 years ago