A networks analysis pipeline for RNASeq time series data
☆14Oct 16, 2020Updated 6 years ago
Alternatives and similar repositories for NetSeekR
Users that are interested in NetSeekR are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆23Sep 28, 2026Updated last month
- Development repository for the multiMiR database's R API☆25Aug 28, 2024Updated 2 years ago
- ☆10Jun 25, 2021Updated 5 years ago
- Code related to scRNA analysis using the scAmpi workflow☆26Jun 24, 2026Updated 4 months ago
- ☆25Feb 6, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆12Oct 23, 2023Updated 3 years ago
- A machine learning model for the prediction of lncRNAs (Singh et. al NAR 2017)☆11Jan 19, 2022Updated 4 years ago
- Debian 13 on the Synology DS923+: every piece of hardware working, installed with the official Debian installer over SSH☆21Updated this week
- Sort Linked Read DNA Into Fragment Specific Clusters☆10Oct 5, 2021Updated 5 years ago
- Tool for Audio CDs, TOC, CUE, CD-Text, CD-Burning, Drive and CD analysis and more.☆11Jan 31, 2019Updated 7 years ago
- Package to analyze Mass Spec Data☆13Aug 24, 2023Updated 3 years ago
- An open-source prediction framework for peptide ion collision cross section (CCS) values with python.☆16Oct 6, 2023Updated 3 years ago
- GRETTA (Genetic inteRaction and EssenTiality neTwork mApper): An R package for mapping genetic interaction and essentiality networks☆12Sep 24, 2026Updated last month
- DART – a fast and accurate RNA-seq mapper with a divide-and-conquer strategy☆12Jun 4, 2020Updated 6 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- RNA-seq data comprehensive data analysis toolbox☆20Oct 18, 2022Updated 4 years ago
- CircAST is a computational tool for circular RNA full-length assembly and quantification using RNA-Seq data.☆10Jun 17, 2021Updated 5 years ago
- ☆12Sep 7, 2019Updated 7 years ago
- Utilities repository to analyze single-cell data from https://www.nature.com/articles/s41467-018-07261-3.☆10Feb 7, 2020Updated 6 years ago
- ☆18Apr 10, 2015Updated 11 years ago
- scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data☆32Dec 22, 2022Updated 3 years ago
- Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data☆18Sep 28, 2026Updated last month
- Surface Marker Detection Using Single Cell Data☆13Apr 21, 2026Updated 6 months ago
- genome annotation (RNAseq and TE) pipeline (draft)☆14Sep 17, 2026Updated last month
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Analysis package for processing counts from genome-wide CRISPR/Cas9 screens☆16Feb 19, 2021Updated 5 years ago
- DRUGZ software☆24Aug 9, 2021Updated 5 years ago
- metabCombiner R Package: Paired Untargeted Metabolomics Feature Matching & Data Concatenation☆13May 29, 2024Updated 2 years ago
- Extracts fastq reads for specified barcode(s) from one or multiple FASTQ files☆13Jan 31, 2016Updated 10 years ago
- Single Cell RNA Intron-Exon counting☆12May 7, 2020Updated 6 years ago
- ALFA: Annotation Landscape for Aligned Reads☆14Jun 30, 2020Updated 6 years ago
- genome basic statistics tool (e.g. n50, n10, ng50,...)☆15Mar 5, 2012Updated 14 years ago
- ☆17Dec 18, 2024Updated last year
- A Pyrodigal extension to predict genes in RNA viruses.☆12May 3, 2026Updated 5 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- a simple R data package for curated cancer pathway-specific gene lists☆14Mar 31, 2020Updated 6 years ago
- A Snakemake workflow for differential expression analysis of RNA-seq data with Kallisto and Sleuth.☆69Oct 15, 2026Updated 2 weeks ago
- AutoTag-YOLOv8 is an object detection project that uses the YOLOv8 model and leverages the power of SAM and DINGO models for automatic la…☆13May 3, 2023Updated 3 years ago
- MACA: Marker-based automatic cell-type annotation for single cell expression data☆26Jul 12, 2023Updated 3 years ago
- Kinase-Substrate Enrichment Analysis (KSEA) App☆10May 2, 2017Updated 9 years ago
- ☆15Apr 6, 2016Updated 10 years ago
- Single-cell analytic toolbox that offers modular workflows for multi-level cellular annotation and user-friendly analysis reports☆11Mar 31, 2026Updated 6 months ago