PacificBiosciences / FALCON-integrateLinks
Mostly deprecated. See https://github.com/PacificBiosciences/FALCON_unzip/wiki/Binaries
☆31Updated 7 years ago
Alternatives and similar repositories for FALCON-integrate
Users that are interested in FALCON-integrate are comparing it to the libraries listed below
Sorting:
- Human Pangenome Reference Consortium - HG002 Data Freeze (v1.0)☆80Updated 3 years ago
- Tools for the analysis of structural variation in genomes☆80Updated last year
- De novo transcriptome assembler for short reads☆63Updated 7 years ago
- Distribution package for the Prgressive Cactus multiple genome aligner. Dependencies are linked as submodules☆85Updated 7 years ago
- SV caller for nanopore data☆91Updated 5 years ago
- The DevNet project on github stores the PacBio DevNet website.☆116Updated 7 years ago
- Coding Genome Reconstruction using Iso-Seq data☆61Updated 3 years ago
- a long-read error correction tool using the multi-string Burrows Wheeler Transform☆45Updated 5 years ago
- ONT assembly and Illumina polishing pipeline☆89Updated 4 years ago
- ☆71Updated 5 years ago
- Bioinformatics tools for dealing with Multiple Alignment Format (MAF) files.☆109Updated 3 years ago
- Python programs for processing GFF3 files☆98Updated last year
- A snakemake pipeline for SV analysis from nanopore genome sequencing☆51Updated 5 years ago
- Lima - Demultiplex Barcoded PacBio Samples☆66Updated 2 months ago
- Whole Genome Simulator for Next-Generation Sequencing☆98Updated 7 months ago
- LoFreq Star: Sensitive variant calling from sequencing data☆105Updated 2 years ago
- Adapter trimming and virtual library creation for Illumina Nextera Mate Pair libraries.☆54Updated 7 years ago
- Software for clustering de novo assembled transcripts and counting overlapping reads☆72Updated 3 years ago
- Tools and software library developed by the ONT Applications group☆63Updated 4 years ago
- A tool for profiling long STRs from short reads☆97Updated 4 years ago
- Data from the Human PanGenomics Project☆60Updated 4 years ago
- ☆49Updated 8 months ago
- Find all significant local alignments between reads☆141Updated last year
- Structural Variant Index☆75Updated 7 months ago
- This repo is DEPRECATED. Please use minimap2, the successor of minimap.☆105Updated 7 years ago
- LRSDAY: Long-read Sequencing Data Analysis for Yeasts☆31Updated last year
- My collection of light bioinformatics analysis pipelines for specific tasks☆75Updated last year
- The LACHESIS software, as described in Nature Biotechnology (http://dx.doi.org/10.1038/nbt.2727)☆78Updated 6 years ago
- scripts to parse IrysView output☆39Updated 9 years ago
- 10x Genomics Reads Simulator☆45Updated last year