PacificBiosciences / FALCON-integrate
Mostly deprecated. See https://github.com/PacificBiosciences/FALCON_unzip/wiki/Binaries
☆31Updated 6 years ago
Related projects ⓘ
Alternatives and complementary repositories for FALCON-integrate
- Tools for the analysis of structural variation in genomes☆77Updated 7 months ago
- Human Pangenome Reference Consortium - HG002 Data Freeze (v1.0)☆75Updated 2 years ago
- 10x Genomics Reads Simulator☆45Updated 10 months ago
- SV caller for nanopore data☆91Updated 4 years ago
- ☆70Updated 4 years ago
- ONT assembly and Illumina polishing pipeline☆91Updated 3 years ago
- Adapter trimming and virtual library creation for Illumina Nextera Mate Pair libraries.☆54Updated 6 years ago
- Lima - Demultiplex Barcoded PacBio Samples☆65Updated 3 weeks ago
- Dotplot large Genomes in an Interactive, Efficient and Simple way☆99Updated 8 months ago
- Wally: Visualization of aligned sequencing reads and contigs☆108Updated 2 months ago
- Simple code snippets and data for the One Flowcell - One Assembly study☆36Updated 6 years ago
- My collection of light bioinformatics analysis pipelines for specific tasks☆71Updated 6 months ago
- Assembly statistic visualisation☆88Updated 11 months ago
- RetroSeq is a bioinformatics tool that searches for mobile element insertions from aligned reads in a BAM file and a library of reference…☆65Updated 2 years ago
- De novo transcriptome assembler for short reads☆62Updated 6 years ago
- High-performance error correction for Illumina resequencing data☆69Updated 8 years ago
- Scripts and programs for the Holt Lab's MinION desktop☆32Updated 4 years ago
- ☆79Updated 6 months ago
- Runs a combination of tools to generate structural variant calls on whole-genome sequencing data☆102Updated 4 years ago
- Coding Genome Reconstruction using Iso-Seq data☆60Updated 3 years ago
- Tools for working with second gen assemblies, fasta sequences, etc☆92Updated 8 years ago
- Reference-based variant calling pipeline for a pair of phased haplotype assemblies☆97Updated 3 years ago
- Structural Variant Index☆70Updated this week
- Genome scaffolding based on HiC data in heterozygous and high ploidy genomes☆59Updated 3 years ago
- Snakemake pipelines for nanopore sequencing data archiving and processing☆88Updated 2 years ago
- 🌈Scaffold genome sequence assemblies using linked or long read sequencing data☆92Updated 2 weeks ago
- LRSDAY: Long-read Sequencing Data Analysis for Yeasts☆32Updated 8 months ago