jts / nanopore-paper-analysisLinks
Code for nanopore paper
☆33Updated 10 years ago
Alternatives and similar repositories for nanopore-paper-analysis
Users that are interested in nanopore-paper-analysis are comparing it to the libraries listed below
Sorting:
- Various scripts and recipes for working with nanopore data☆34Updated 9 years ago
- Experimental pipeline for correcting nanopore reads☆39Updated 8 years ago
- Analysis tool for Nanopore sequencing data☆34Updated 6 years ago
- Assembler for raw de novo genome assembly of long uncorrected reads.☆37Updated 5 years ago
- Tools for making blobplots or Taxon-Annotated-GC-Coverage plots (TAGC plots) to visualise the contents of genome assembly data sets as a …☆47Updated 3 years ago
- UCSC Nanopore☆43Updated 6 years ago
- My experimental tools on top of htslib. NOT OFFICIAL!!!☆56Updated 2 years ago
- Tools and software library developed by the ONT Applications group☆63Updated 4 years ago
- A tool to reduce the size of Oxford Nanopore Technologies' datasets without losing information☆31Updated last year
- Scripts and programs for the Holt Lab's MinION desktop☆32Updated 4 years ago
- Scripts for implementing read until and other examples.☆32Updated 5 years ago
- NaS is a hybrid approach developped to take advantage of data generated using MinION device. We combine Illumina and Oxford Nanopore tech…☆15Updated 8 years ago
- Fast and pretty dotplots for whole genomes assemblies using minimap and R/ggplot2☆76Updated 8 years ago
- Adapter trimming and virtual library creation for Illumina Nextera Mate Pair libraries.☆54Updated 7 years ago
- ☆31Updated last year
- A toolkit for annotation of transposable element families from unassembled sequence reads☆30Updated 2 years ago
- Genome guided re-segmention and visualization for raw nanopore sequencing data.☆47Updated 6 years ago
- Error correction for Oxford Nanopore data☆47Updated 4 years ago
- Pauvre: QC and genome browser plotting Oxford Nanopore and PacBio long reads.☆54Updated 9 months ago
- The final version 2 release of our software to detect core genes in eukaryotic genomes☆29Updated 10 years ago
- More realistic simulator for genomic DNA sequences from Illumina machines that achieves a similar k-mer spectrum as the original☆52Updated 3 years ago
- Improve the quality of a denovo assembly by scaffolding and gap filling☆56Updated 4 years ago
- ☆17Updated 7 years ago
- A bioinformatics tutorial demonstrating a best-practice workflow to review a flowcell's sequence_summary.txt☆31Updated 4 years ago
- Advanced metagenomic Sequence Analysis in R☆15Updated 7 years ago
- A comprehensive toolkit for running Oxford Nanopore's MinION☆12Updated 6 years ago
- Pipeline for structural variant image curation and analysis.☆48Updated 3 years ago
- Fully automated generation of UCSC assembly hubs☆34Updated 10 months ago
- A method of assessing sequence complexity based on kmer frequencies☆32Updated 7 years ago
- 10x Genomics Reads Simulator☆45Updated last year