kwanjeeraw / metaboxLinks
a toolbox for metabolomic data analysis, visualization and ‘omic’ integration
☆13Updated 7 years ago
Alternatives and similar repositories for metabox
Users that are interested in metabox are comparing it to the libraries listed below
Sorting:
- Open-Source Software for Omic Data Analysis and Visualization☆40Updated this week
- R functions for automation of biomarker discovery based on processing downstream of large LC-MS datasets from any peak picking software☆10Updated 8 years ago
- ☆10Updated 6 years ago
- DEAPP shiny App☆30Updated 3 years ago
- a Graph database and R package for omic data integration☆20Updated 9 years ago
- Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects☆44Updated 3 weeks ago
- Interactive Differential Expression AnaLysis - DE made accessible and reproducible☆31Updated last week
- TFregulomeR reveals transcription factors’ context-specific features and functions☆15Updated 3 years ago
- Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"☆16Updated 6 years ago
- This is the ensembldb development repository.☆36Updated 3 months ago
- Web-based User-friendly Workflow for Metabolomics and Proteomics Data Analysis☆18Updated 2 years ago
- Tutorial for working with cloud infrastructure and AWS from R☆20Updated 8 years ago
- R interface to Chemical Translation Service (CTS)☆17Updated last year
- a metabologenomic pipeline integrating metabolomic and genomic data to identify novel RiPPs and their BGCs☆12Updated 4 years ago
- Exploration of Omics data☆25Updated 4 years ago
- Source code for ScanGEO Shiny App☆15Updated 3 years ago
- Interactive benchmarking of ranking and assignment methods☆16Updated last month
- Elastic, reproducible, and reusable genomic data science tools from R backed by cloud resources☆34Updated 4 years ago
- An R Bioconductor package providing interactive connections to igv.js (the Integrative Genomics Viewer) in a web browser☆46Updated last year
- Template for building a bioconductor workshop package using github actions☆21Updated 5 months ago
- iDEP: integrated Differential Expression & Pathway analysis☆14Updated 6 years ago
- The EnrichmentMap Cytoscape App allows you to visualize the results of gene-set enrichment as a network.☆35Updated last year
- FELLA: an R package for Metabolomics data enrichment through diffusion☆22Updated 4 years ago
- Analysis examples based on the ISB-CGC hosted TCGA data, using R and R Markdown.☆31Updated 8 years ago
- R package for extracting mutation signatures from a list of somatic mutations☆37Updated 6 years ago
- Bioconductor2017 workshop - Analysis of single-cell RNA-seq data: Normalization, dimensionality reduction, clustering, and lineage infere…☆11Updated 8 years ago
- ☆17Updated 4 years ago
- Scripts for reproducing analyses of large RNA-seq datasets☆15Updated 6 years ago
- A Shiny App for Interactive Multi-OMICS Cancer Data Visualization and analysis☆21Updated last year
- Machine learning use cases for teaching☆13Updated 8 years ago