a toolbox for metabolomic data analysis, visualization and ‘omic’ integration
☆13Jun 21, 2018Updated 7 years ago
Alternatives and similar repositories for metabox
Users that are interested in metabox are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- R interface to Chemical Translation Service (CTS)☆17Jul 27, 2024Updated last year
- MSLibrarian is an R-package to optimize predicted spectral libraries for DIA proteomics☆14Aug 25, 2022Updated 3 years ago
- metabCombiner R Package: Paired Untargeted Metabolomics Feature Matching & Data Concatenation☆13May 29, 2024Updated 2 years ago
- Supplementary material for the paper "Improved batch correction in untargeted MS-based metabolomics" by R. Wehrens, et al. Metabolomics, …☆15Nov 13, 2018Updated 7 years ago
- metabolite identification R-package for metabolomic high-resolution LC-MS datasets.☆16Apr 19, 2017Updated 9 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- ☆17Apr 19, 2021Updated 5 years ago
- Visualization of multiple tandem mass spectrometry data☆10Jun 15, 2020Updated 5 years ago
- R Interface to the ClassyFire REST API☆14May 20, 2026Updated last week
- R Interface to the Metabolights REST API☆11May 19, 2026Updated last week
- Metabolomics experimental design, sample metadata configuration, and sample data acquisition.☆11Jun 28, 2018Updated 7 years ago
- The mwtab package is a Python library that facilitates reading and writing files in mwTab format used by the Metabolomics Workbench for a…☆12Apr 27, 2026Updated last month
- data processing for MS-based metabolomics☆15Nov 10, 2024Updated last year
- A set of metabolomics tools for use in Galaxy☆11Sep 2, 2022Updated 3 years ago
- Tools Databases Resources in Metabolomics & Integrated Omics in 2015-2016☆12Mar 7, 2020Updated 6 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Risa allows to access metadata/data in ISA-tab format and builds Bioconductor data structures. Apart from parsing ISA-tab files, the pack…☆20Oct 17, 2018Updated 7 years ago
- Code and results from TotalSeqC antibody titration and pipeline benchmarking for CITE-seq experiments☆10Mar 13, 2021Updated 5 years ago
- ☆13Nov 30, 2015Updated 10 years ago
- Demo for queryBuildR R package☆10Nov 13, 2015Updated 10 years ago
- Chemical Similarity Enrichment analysis of metabolomics datasets☆32Jul 19, 2024Updated last year
- A Bioconductor R package - Automated Evaluation of Precursor Ion Purity for Mass Spectrometry Based Fragmentation in Metabolomics☆16Mar 12, 2026Updated 2 months ago
- ☆55Apr 15, 2021Updated 5 years ago
- Paired-seq☆15Jul 17, 2024Updated last year
- A Pipeline for LC-MS/MS Metabolomics Data Process and Analysis☆16May 8, 2026Updated 3 weeks ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Molecular atlas of the human brain vasculature accross development, adulthood and disease at the single-cell level☆14Jul 10, 2024Updated last year
- Python library for large-scale targeted metabolomics.☆23Mar 2, 2026Updated 2 months ago
- R for Mass Spectrometry documentation☆15May 22, 2026Updated last week
- SuperCell for Cytometry data☆13Oct 14, 2025Updated 7 months ago
- This repo contains the code needed to run the R package Autotuner. Autotuner is used to identify proper parameters during metabolomics da…☆16Jan 21, 2021Updated 5 years ago
- ☆14Apr 16, 2026Updated last month
- Brings Orbitrap mass spectrometry data to life; multi-platform, fast and colorful R package☆37May 1, 2024Updated 2 years ago
- A tool to generate JSON Schema files from Excel Sheet☆12Jun 6, 2018Updated 7 years ago
- Spectral library searching using approximate nearest neighbor techniques.☆49Feb 11, 2026Updated 3 months ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- The MetaRbolomics book. A review of R packages in BioC, CRAN, gitlab and github.☆34Mar 23, 2021Updated 5 years ago
- mzTab Reporting MS-based Proteomics and Metabolomics Results☆46Apr 1, 2025Updated last year
- A modular JavaScript viewer for mass spectrometry data☆12May 20, 2022Updated 4 years ago
- Various Ideas for Confounder Adjustment in Regression☆24May 8, 2023Updated 3 years ago
- Code for 'Topological and kernel-based microbial phenotype prediction from MALDI-TOF mass spectra'☆12Apr 11, 2022Updated 4 years ago
- This repository attempts to implement a neural net that leverages the transformer architecture to predict peptide properties (retention t…☆11Nov 22, 2024Updated last year
- G-Aligner: a graph-based feature alignment method for untargeted LC-MS-based metabolomics☆17Mar 9, 2024Updated 2 years ago